Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_C02
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 33 0.036
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 29 0.59
SPBC1A4.06c |||mitochondrial matrix protein import protein|Schiz... 28 1.4
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 27 2.4
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 27 3.1
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 26 4.1
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 4.1
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 26 4.1
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 26 5.5
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 26 5.5
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 26 5.5
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 25 7.2
SPAC11G7.05c |||[acyl-carrier protein] S-malonyltransferase Mct1... 25 9.5
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 33.1 bits (72), Expect = 0.036
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +2
Query: 344 PGNPEVDRSTMYQQFHDFINNCNGEQVRFATDLYADL--CHLLTNHLVXIKQPIRGLQIL 517
PG E+D + Q D ++ EQ RF D++ DL L ++ IK P+ +++L
Sbjct: 137 PGTNEIDVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMT-IKML 195
Query: 518 KKAITKIQLFDSQLTSIHADLCQLCLLSKCMKPALEFLDTD 640
+K K + + L S DL Q+ + +K F+ D
Sbjct: 196 EKRFKKGEY--TTLESFVKDLNQMFINAKTYNAPGSFVYED 234
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 29.1 bits (62), Expect = 0.59
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 116 YLDTTITMASPLQQFVNNVRTMSASGNFRDLYEIIAKSDEVLQRNSFHLNTVLETLD 286
Y+ TT+T S ++T+S G L E+I S NSFHL V ++++
Sbjct: 182 YITTTLTSGSSYPVSTTTLQTVS--GTQSGLVEVITPSCGCNPENSFHLRLVGDSIN 236
>SPBC1A4.06c |||mitochondrial matrix protein import
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 131 ITMASPLQQFVNNVRTMSASGNFRDLYEIIAKSDEVLQRNSFHLNTVL 274
+T + + + N TM +G F+ I+ DE + NS++L++ L
Sbjct: 159 VTSKKDVYEDLKNWNTMYLAGRFQKPVVILKGEDEFYKENSYNLSSAL 206
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 116 YLDTTITMASPLQQFVNNVRTMSASGNFRDLYEIIAKSDEVL 241
Y+ TTI AS +Q V NV+ + EI+ K DE+L
Sbjct: 294 YVSTTILGASKPEQIVENVKAVEFIDKLTP--EILKKIDEIL 333
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +2
Query: 404 NCNGEQVRFATDLYADLCHLLTNHLVXIKQPIRGLQILK 520
N +G+++RF T+L + ++ + + +QP+ G +L+
Sbjct: 286 NPHGKEIRFITNLSEEEKNMASKISIAFEQPVCGFDLLR 324
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 26.2 bits (55), Expect = 4.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +2
Query: 431 ATDLYADLCHLLTN-HLVXIKQPI---RGL--QILKKAITKIQLFDSQLTSIHADLCQLC 592
A + DL ++ TN H+V + + GL + + + +I F + I +C +C
Sbjct: 173 AVSISTDLKYIPTNQHIVGVMAAVIVFHGLVNSLSTRWLDRITRFYATFHLIVLVVCMIC 232
Query: 593 LLSKCMK 613
LL+KC K
Sbjct: 233 LLAKCPK 239
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 412 W*TSSICN*FICRFVSSTHKSFGXNQTTNKGPANIKKGYNKDTIV*FTADLNSC 573
W T S F C ++ +FG N TT PA + + T +A L C
Sbjct: 430 WDTISTGGRFACFVIAQFFSNFGPNATTFLYPAEVFPARVRGTAHGLSAALGKC 483
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 128 TITMASPLQQFVNNVRTMSASGNFRDLYEIIAKSDEVLQRNSFHLNTVLETLDIQQHSL 304
+ T A+ QF+ + + S + DLY+++ S E+L ++ N VL+ + + L
Sbjct: 176 SFTSANEFIQFLKRLASSKLSIHTFDLYKLVRNSPELLTLEAY--NIVLQCMSTDDYFL 232
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 299 SLGVLAVLVAK-FSLPPGNPEVDRSTMYQQFHDFINNC 409
+L + + V+K FS G P V R + F+NNC
Sbjct: 117 TLEIAMITVSKMFSSTVGRPAVTRELVTPNLPTFVNNC 154
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 236 VLQRNSFHLNTVLETLDI---QQHSLGVLAV 319
++ RN FHL L++L + QQH+L + V
Sbjct: 30 IVGRNEFHLKETLQSLSVAKGQQHTLTIADV 60
>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 65 KRN--NLFKHLLIQRTYIIYLDTTITMASPLQQFVN 166
KRN N+F +++ TY I LD+T+ + VN
Sbjct: 12 KRNVLNMFSIVIVSATYSISLDSTVLYPAVYHAIVN 47
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 125 TTITMASPLQQFVNNVRTMSASGNFRDLYEIIAKSDEVLQRNSFHL 262
TT+T S VRT ASG E+I S NSFHL
Sbjct: 142 TTLTSGSSYPVATTTVRT--ASGTQSGEVEVITPSCGCSPENSFHL 185
>SPAC11G7.05c |||[acyl-carrier protein] S-malonyltransferase Mct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 318
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +2
Query: 119 LDTTITMASPLQQFVNNVRTMSASGNFRDLYEIIAKSDEVLQRNSFHLNTVLETLDIQQH 298
L T+T P F+N V + D+ + + VL + L ++ TL
Sbjct: 134 LAITLTSRFPTDNFLNTVYSAVQKYRLIDIANVNSDRQIVLSGDKKELESITSTLSELVR 193
Query: 299 SLGVL 313
SLG L
Sbjct: 194 SLGKL 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,663,103
Number of Sequences: 5004
Number of extensions: 54250
Number of successful extensions: 137
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -