Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_C02
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104...    89   2e-18
01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705     30   1.9  
02_01_0600 + 4460399-4460471,4461249-4461388,4461967-4462067,446...    28   7.5  
02_05_1351 - 35855543-35856751                                         27   9.9  

>08_01_0130 +
           1040696-1041049,1042135-1042275,1042422-1042673,
           1043797-1043904,1044289-1044593,1044720-1044841,
           1044979-1045225,1045308-1045365,1045414-1045530,
           1045718-1045753,1046492-1046554,1046958-1047047,
           1047241-1047399,1047475-1047596,1048145-1048217,
           1048307-1048375
          Length = 771

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
 Frame = +2

Query: 128 TITMASPLQQFVNNVRTMSASGN-FRDLYEIIAKSD-EVLQRNSFHLNTVLETLDIQQHS 301
           T      ++  V +++ +S SG     L+ ++ ++D E L+ +S  L   L  L    HS
Sbjct: 321 TAAAMETVETLVAHIQGLSGSGEELAHLHNLLRQADGEPLRAHSAALLPFLAQLHPSAHS 380

Query: 302 LGVLAVLVAKFSLPPGNPEVDRSTMYQQFHDFINNCNGEQVRFATDLYADLCHLLTNHLV 481
           LG L +L A  S                  DF+ +C+ EQ+R A D +  +C +  N ++
Sbjct: 381 LGFLYLLEAFASSASNLRAQGGGDFLVTTADFLVSCSAEQIRLAPDKFLSVCRVFKNEVM 440

Query: 482 XIKQPIRGLQILKKAITKIQLFDSQLTSIHADLCQLCLLSKCMKPALEFLDTDV 643
            +  PIRG+  L+ AI KIQ    +LT IHAD   LCLL+K  K  L  L+ D+
Sbjct: 441 QLNAPIRGIAPLRAAIRKIQTSSEELTPIHADYLLLCLLAKQYKAGLSVLEDDI 494


>01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705
          Length = 1172

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +2

Query: 125 TTITMASPLQQFVNNVRTMSASGNFRDLYEIIAKSDEVLQ--RNSFHLNTVLETLDIQQH 298
           T + +A P+QQ++ + + +SASG    L +I   S + +    +    N +LE L I+Q 
Sbjct: 715 TPLKLALPIQQYLEDKKLVSASGT--GLVKIWGTSPDSIDAAEDRKRFNAILEELGIEQP 772

Query: 299 SLGV 310
             G+
Sbjct: 773 KGGI 776


>02_01_0600 +
           4460399-4460471,4461249-4461388,4461967-4462067,
           4462150-4462189,4462948-4463019,4463208-4463264,
           4463347-4463421
          Length = 185

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +2

Query: 191 GNFRDLYEIIAKSDEVLQRNSFHLNTVLETLDIQQHSLGVLAVLVAKFSLPPGNPEVDRS 370
           GN ++LYE + K+  V+Q  +  +   L   +I  +  G L  +    +  P   E+  +
Sbjct: 76  GNMQNLYETVKKAQMVVQVEAVRVQKELAATEIDGYCEGELIKVTLSGNQQPVRVEITEA 135

Query: 371 TM 376
            M
Sbjct: 136 AM 137


>02_05_1351 - 35855543-35856751
          Length = 402

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 341 PPGNPEVDRSTMYQQFHDFINNCNGEQVRFATDLYADLCHLLTNHLVXI 487
           PP +P    ++  Q  H F+N    ++   A     D+  L+ NHLV +
Sbjct: 4   PPPSPSPSPASGAQYAHQFLNTALSQRGPSALPYAEDVKWLIRNHLVAL 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,091,123
Number of Sequences: 37544
Number of extensions: 310091
Number of successful extensions: 657
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)