Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_C01
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-3|CAB63331.1| 122|Caenorhabditis elegans Hypothetical pr... 174 2e-44
Z82077-4|CAB63332.1| 70|Caenorhabditis elegans Hypothetical pr... 101 1e-22
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 27 3.8
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 27 3.8
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 27 3.8
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 27 3.8
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 27 3.8
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 26 8.8
AC024860-2|AAN84888.1| 173|Caenorhabditis elegans Hypothetical ... 26 8.8
>Z82077-3|CAB63331.1| 122|Caenorhabditis elegans Hypothetical
protein W09C5.6a protein.
Length = 122
Score = 174 bits (423), Expect = 2e-44
Identities = 78/118 (66%), Positives = 97/118 (82%)
Frame = +3
Query: 48 PKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDT 227
PK E+K +S INEVVTREYT+++H R+ G+G KKRAPRAI EI+KFA+ QM T D+RVDT
Sbjct: 3 PKNEKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDT 62
Query: 228 RLNKFLWSKGVRNVPFRVRVRLSRXRNDDEXSAHKLFTLVTYVPVASIKGLXTENVDA 401
+LNKF+WSKG++NVP+RVRVRLSR RN+DE SA KL+TL TYVP + GL NVD+
Sbjct: 63 KLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHGLTNVNVDS 120
>Z82077-4|CAB63332.1| 70|Caenorhabditis elegans Hypothetical
protein W09C5.6b protein.
Length = 70
Score = 101 bits (243), Expect = 1e-22
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = +3
Query: 198 MGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDDEXSAHKLFTLVTYVPVASIKG 377
M T D+RVDT+LNKF+WSKG++NVP+RVRVRLSR RN+DE SA KL+TL TYVP + G
Sbjct: 1 MKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHG 60
Query: 378 LXTENVDA 401
L NVD+
Sbjct: 61 LTNVNVDS 68
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 106 VYSRVTTSFMADLPFLSPLGLAIVILSFVYRNS 8
++ R+ + +DLP + LG+A+V L+ + +N+
Sbjct: 137 IHERIDGIYESDLPAMVNLGMAVVTLAHIGKNA 169
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 106 VYSRVTTSFMADLPFLSPLGLAIVILSFVYRNS 8
++ R+ + +DLP + LG+A+V L+ + +N+
Sbjct: 137 IHERIDGIYESDLPAMVNLGMAVVTLAHIGKNA 169
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 106 VYSRVTTSFMADLPFLSPLGLAIVILSFVYRNS 8
++ R+ + +DLP + LG+A+V L+ + +N+
Sbjct: 137 IHERIDGIYESDLPAMVNLGMAVVTLAHIGKNA 169
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 106 VYSRVTTSFMADLPFLSPLGLAIVILSFVYRNS 8
++ R+ + +DLP + LG+A+V L+ + +N+
Sbjct: 137 IHERIDGIYESDLPAMVNLGMAVVTLAHIGKNA 169
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 106 VYSRVTTSFMADLPFLSPLGLAIVILSFVYRNS 8
++ R+ + +DLP + LG+A+V L+ + +N+
Sbjct: 137 IHERIDGIYESDLPAMVNLGMAVVTLAHIGKNA 169
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 26.2 bits (55), Expect = 8.8
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +3
Query: 48 PKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRA---IKEIRKF-AEKQMGTPDI 215
PK E + + I E + R Y++ +RL + APRA + R+F A K+M +
Sbjct: 71 PKNEDEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEMAEKEA 130
Query: 216 RVDTRLNKFLWSKGVRNVP 272
++ + N+ L ++G+ P
Sbjct: 131 SIEEQRNR-LMAEGIAVPP 148
>AC024860-2|AAN84888.1| 173|Caenorhabditis elegans Hypothetical
protein Y71H2AR.3 protein.
Length = 173
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 129 HGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 221
+ V K + P+ I++IRKF + + +PD V
Sbjct: 126 YNVDSKIKQPQVIEDIRKFVKIHVDSPDSEV 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,634,251
Number of Sequences: 27780
Number of extensions: 161943
Number of successful extensions: 360
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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