Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B24
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 31 0.66
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF047657-12|AAK18941.3| 367|Caenorhabditis elegans Serpentine r... 29 3.5
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 4.6
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 4.6
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 4.6
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 28 6.1
AC087081-16|AAG37970.1| 252|Caenorhabditis elegans Hypothetical... 28 6.1
Z68343-4|CAA92780.2| 298|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68342-11|CAA92777.2| 298|Caenorhabditis elegans Hypothetical p... 27 8.1
Z68314-5|CAA92663.1| 334|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 434 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 589
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 434 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 589
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 434 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 589
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 434 RTVSFPADDQLVTQYCEPENPWKH-----VPATNRAQIAADYLELCRRYNTTPIDSV 589
RTVSFPAD L+T Y E + H + ++I Y E C+R P +V
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQCAPSAAV 134
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 398 DNEISEKNNKKIRTVSFPADDQLVTQYCEPENPWKHVPATNRAQIAADYLELCRRYNTTP 577
+N E+ KKIR + P L+T+ P P P T A I ++ +R +++
Sbjct: 566 ENGNDEEQEKKIRRIPIPL--VLITEPSNPSTPLATTPVTTAASICLWNNDISKRSSSST 623
Query: 578 ID 583
D
Sbjct: 624 ED 625
>AF047657-12|AAK18941.3| 367|Caenorhabditis elegans Serpentine
receptor, class w protein4 protein.
Length = 367
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 69 HSAPFIHRLPYWIREARQKGQQ 4
H+ F+ P+WIRE R+K Q+
Sbjct: 78 HTLTFLAFSPFWIREVRKKNQE 99
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 424 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 525
Q Y +ISRRR TVL + L T SG + R
Sbjct: 783 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 816
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 424 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 525
Q Y +ISRRR TVL + L T SG + R
Sbjct: 807 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 840
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 424 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 525
Q Y +ISRRR TVL + L T SG + R
Sbjct: 793 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 826
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 424 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 525
Q Y +ISRRR TVL + L T SG + R
Sbjct: 798 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 831
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 424 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 525
Q Y +ISRRR TVL + L T SG + R
Sbjct: 439 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 472
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 424 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 525
Q Y +ISRRR TVL + L T SG + R
Sbjct: 503 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 536
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 424 QKNTYSVISRRRSASHTVLRARKPLETCSGNESR 525
Q Y +ISRRR TVL + L T SG + R
Sbjct: 798 QGKVYPLISRRRFDQMTVLEGQNILATISGRKRR 831
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 437 TVSFPADDQLVTQYCEPENPWKHVPATNRAQIAADYLELCRRYNTTPIDSVL 592
T +F VT++ P H PAT +A+D+L + + Y+ ++ +L
Sbjct: 979 TAAFRFGHSTVTRFT-PMQETVHDPATCVVDLASDFLNMSKIYDNEAVEQIL 1029
>AC087081-16|AAG37970.1| 252|Caenorhabditis elegans Hypothetical
protein Y82E9BL.3 protein.
Length = 252
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 188 PFVHHLVNRPAITRFLFXNIIRFSIFFVTIFXNRSSLNQNILH 60
P L N ++ F+F I+ ++ + N SS N NI+H
Sbjct: 138 PKTTKLTNLQKVSIFIFFTIMEVYYIYLCTWTNSSSNNYNIIH 180
>Z68343-4|CAA92780.2| 298|Caenorhabditis elegans Hypothetical
protein F38E11.9 protein.
Length = 298
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 356 PFSLIPTEKAQNVCDNEISEKNNKKIRTVSFPADDQLVTQYC 481
PFSL+ +E QN N + + + ++FP + + C
Sbjct: 126 PFSLMASENFQNFLKNVCLKSGHPDVGNITFPTRETIQNYIC 167
>Z68342-11|CAA92777.2| 298|Caenorhabditis elegans Hypothetical
protein F38E11.9 protein.
Length = 298
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 356 PFSLIPTEKAQNVCDNEISEKNNKKIRTVSFPADDQLVTQYC 481
PFSL+ +E QN N + + + ++FP + + C
Sbjct: 126 PFSLMASENFQNFLKNVCLKSGHPDVGNITFPTRETIQNYIC 167
>Z68314-5|CAA92663.1| 334|Caenorhabditis elegans Hypothetical
protein F07H5.2 protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 332 PDKDIACAPFSLIPTEKAQNVCDN-EISEKNNK 427
P+ D+A + FSL+P KAQ CD E+ +++ K
Sbjct: 165 PNGDVA-SKFSLMPEGKAQMTCDRFEVFDEDQK 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,498,633
Number of Sequences: 27780
Number of extensions: 300775
Number of successful extensions: 782
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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