Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B20
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -2

Query: 109 SFQQDLGALIVIIFDMLFSNSKVGIRVL 26
           +FQ ++  L+ +I +  +SN ++ +R L
Sbjct: 14  AFQAEIAQLMSLIINTFYSNKEIFLREL 41


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/47 (21%), Positives = 21/47 (44%)
 Frame = +2

Query: 494 YAQDLEKTGSVIHMPVPSSYNDVGEDASLRDHVXLVWYDRRFHVPPW 634
           Y   + +TG V +    +S+ D  +D +L   +  +    +  +P W
Sbjct: 493 YVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKILSQAKQEIPEW 539


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 211 IQLILTSEESFIKHDKAEICFRASANMHSVRD 306
           ++ + T EE+ ++ DKA    RA A  HS  D
Sbjct: 95  LESLATVEETVVR-DKAVESLRAVAQQHSPAD 125


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +1

Query: 385 RIVPTCYRNQXLXNPTWDMEFSAIACRPR 471
           R + T Y N  L     +  F+   CRPR
Sbjct: 5   RRLRTAYTNTQLLELEKEFHFNKYLCRPR 33


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +1

Query: 385 RIVPTCYRNQXLXNPTWDMEFSAIACRPR 471
           R + T Y N  L     +  F+   CRPR
Sbjct: 136 RRLRTAYTNTQLLELEKEFHFNKYLCRPR 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,723
Number of Sequences: 336
Number of extensions: 3398
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)