Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B20
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772...    33   0.15 
02_02_0270 + 8431503-8431830,8431961-8432149,8434288-8434412,843...    32   0.35 
03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743...    28   5.7  
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708     28   7.5  
09_04_0569 + 18600750-18602117                                         27   9.9  

>02_05_0136 +
           26174965-26175849,26176965-26177030,26177124-26177258,
           26177369-26177434,26177516-26177701,26177777-26177863,
           26177985-26178098,26178174-26178298,26178375-26178483,
           26179298-26179423,26179511-26179831,26180146-26180269,
           26180405-26180529
          Length = 822

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 275 ALLLICIVSVTIAVVPLSSSSNEINQLYKRKLPSNGGALYPRATETXDLXTLHGI 439
           AL+ + +++V +  +P+S S +   QL  RK  ++GGA    +T+      + G+
Sbjct: 297 ALIYVVLIAVVLQRLPISFSQHSAGQLRNRKNSNSGGAKVSESTDIVTFADVAGV 351


>02_02_0270 +
           8431503-8431830,8431961-8432149,8434288-8434412,
           8434527-8434703,8434798-8434871,8434978-8435713
          Length = 542

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = -1

Query: 650 VSPSATTAERGTSCRTTPSXHGPEERRLRPRHYMKKAQACVSQSLSFQDL 501
           V P+     +GT   T+   + P   RL+P  +M K++A  + ++S Q++
Sbjct: 259 VDPTGGVLTKGTHSLTSSPDNAPTSGRLKPMRFMSKSKAKAAPTISNQNM 308


>03_02_0762 -
           10968888-10969466,10972522-10974175,10974277-10974359,
           10974435-10974533,10974620-10974706,10974782-10974838,
           10974939-10975065,10975344-10975465,10975685-10975732,
           10975867-10976268
          Length = 1085

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = -1

Query: 647 SPSATTAERGTSCRTTPSXHGPEERRLRPRHYMKKAQACV-SQSL----SFQDLAHTSHX 483
           S S   + +G S R TPS       +   R  M +A AC+ S+SL    S   L  + H 
Sbjct: 447 SKSDQESSKGESHRYTPSPADDRYHKATKRQRMDEAGACISSRSLNNCQSDHHLHESGHR 506

Query: 482 YSRILGRQAMA 450
             + L RQ++A
Sbjct: 507 AKKELKRQSLA 517


>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
          Length = 488

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 511 FKILRIPAIXIAEFWVGRRWPKTPY 437
           +++   P     E W  +RWP++PY
Sbjct: 346 YQVFCQPLFAFVEKWAAQRWPESPY 370


>09_04_0569 + 18600750-18602117
          Length = 455

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = -1

Query: 656 PVVSPSATTAERGTSCRTT--PSXHGPEERRLRPRHYMKKAQACVSQSLSFQDLAHTSHX 483
           P VSPSA+T+   +SC  T  P        R + R    ++++ V+ + S       +H 
Sbjct: 179 PPVSPSASTSTSSSSCSATSSPPPQLQGHGRSQLRRIFARSESSVAATTSTSSPGQYTHN 238

Query: 482 YSRILGRQAMAENSISHV 429
            +  L R      +  H+
Sbjct: 239 LAWFLKRSDGGGGAADHL 256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,715,541
Number of Sequences: 37544
Number of extensions: 367117
Number of successful extensions: 897
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)