Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B20
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132877-15|CAC70111.1|  628|Caenorhabditis elegans Hypothetical...    69   3e-12
AL137227-6|CAB70236.2|  159|Caenorhabditis elegans Hypothetical ...    31   0.72 
Z81095-3|CAB03159.2|  494|Caenorhabditis elegans Hypothetical pr...    31   0.95 
Z83102-4|CAB05467.1|  259|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U15304-1|AAA50369.1|  407|Caenorhabditis elegans PES-10 protein.       29   2.9  
AL110485-21|CAB60370.1|  407|Caenorhabditis elegans Hypothetical...    29   2.9  
Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z93386-3|CAB07648.1|  230|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AL132877-15|CAC70111.1|  628|Caenorhabditis elegans Hypothetical
           protein Y105E8B.9 protein.
          Length = 628

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +2

Query: 389 LYPRATETXDLXTLHGIWSFRPSPADP-EFGYXNGWYAQDLEKTGSVIHMPVPSSYNDVG 565
           L+ +  E   + +L G+W+F   P +  + G  N W   DLE+  +   MPVPS+YND+G
Sbjct: 23  LHVQKNEIRTVDSLDGLWTFVREPHNGGDVGIVNQWNTLDLERFQNATVMPVPSAYNDLG 82

Query: 566 EDASLRDHVXLVWYDRRFHVP 628
             + LRDH+  VWY+++  VP
Sbjct: 83  TGSELRDHIGWVWYEKKEFVP 103


>AL137227-6|CAB70236.2|  159|Caenorhabditis elegans Hypothetical
           protein F58D5.5 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
 Frame = -1

Query: 647 SPSATTAERG----TSCRTTPSXHG-PEERRLRPRHYMKKAQACVSQSLS 513
           SPS+++   G    +S +TTP   G P +++ +PRH  +KAQ+    SL+
Sbjct: 11  SPSSSSRPSGGGGQSSHQTTPKSSGNPRQQQAQPRHRQRKAQSSSPASLA 60


>Z81095-3|CAB03159.2|  494|Caenorhabditis elegans Hypothetical
           protein F59F4.3 protein.
          Length = 494

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 263 RFAFALLLICIVSVTIAVVPLSSSSNEINQLYKRKLPSNGGALY 394
           RF F  +L+ +VS T+  +P++   N+++  + R +P+   A Y
Sbjct: 447 RFVFWAMLLGVVSTTVMFIPMTYVMNDLDLSWCRLMPNTTFAKY 490


>Z83102-4|CAB05467.1|  259|Caenorhabditis elegans Hypothetical
           protein C54C8.5 protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -1

Query: 308 SSRTLCILAEARKQISALSCLIKLSS-LVRIN*ISILLFESSHPRYLFV--FLTIPNTKK 138
           S+RT+ ++    K+I+ L  +I+L++ L  +  +  ++ E  +     V   L   N   
Sbjct: 11  SNRTIIVVTPTYKRITRLPDMIRLANTLAHVKNLHWIVVEDGYGIVPAVRELLEKTNLSY 70

Query: 137 KFNAQNKIKQFPTRSWRAYRNNIRYV 60
            + A    K +PTR W      +RY+
Sbjct: 71  TYMAHKTAKGYPTRGWYQRTMALRYI 96


>U15304-1|AAA50369.1|  407|Caenorhabditis elegans PES-10 protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
 Frame = +1

Query: 94  DLVGNCFILFCA----LNFFLVFGIVKKTNKYRG*LDSNSKI--EIQLILTSEESFIKHD 255
           +L  +CF +  +    LN +  FGI +K  +Y+G ++   KI  ++  +L   E F++ D
Sbjct: 113 ELTRSCFDIIVSFGLTLNAYDEFGIFRKAMEYQGQMEEADKIISDVDAMLLRNE-FLEED 171

Query: 256 KAE 264
           +AE
Sbjct: 172 EAE 174


>AL110485-21|CAB60370.1|  407|Caenorhabditis elegans Hypothetical
           protein Y46G5A.27 protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
 Frame = +1

Query: 94  DLVGNCFILFCA----LNFFLVFGIVKKTNKYRG*LDSNSKI--EIQLILTSEESFIKHD 255
           +L  +CF +  +    LN +  FGI +K  +Y+G ++   KI  ++  +L   E F++ D
Sbjct: 113 ELTRSCFDIIVSFGLTLNAYDEFGIFRKAMEYQGQMEEADKIISDVDAMLLRNE-FLEED 171

Query: 256 KAE 264
           +AE
Sbjct: 172 EAE 174


>Z81462-3|CAB03842.2| 1034|Caenorhabditis elegans Hypothetical
           protein C04H5.3 protein.
          Length = 1034

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 326 SSSSNEINQLYKRKLPSNGGALYPRATETXDLXTLHGIWSFRPSPADPEFGYXN 487
           +S+ + ++  Y  +L  N   + P  + T DL T+    ++  + A PEF Y N
Sbjct: 203 ASAQDLVDNGYMNELRDNARVILPIFSSTRDLSTVFRNATWLANMASPEFIYIN 256


>Z93386-3|CAB07648.1|  230|Caenorhabditis elegans Hypothetical
           protein R11H6.4 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 236 SSLVRIN*ISILLFESS--HPRYLFVFLTIPNT 144
           ++  R+  +SI+LF  S  HP   F FL+ PNT
Sbjct: 47  NNFCRLLVVSIILFYQSVTHPHRFFFFLSSPNT 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,153,874
Number of Sequences: 27780
Number of extensions: 320715
Number of successful extensions: 832
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)