Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B18
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit... 314 2e-84
UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4; Euk... 235 9e-61
UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, wh... 192 8e-48
UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1; ... 190 2e-47
UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit co... 186 4e-46
UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamo... 134 2e-30
UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lambl... 124 1e-27
UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit, p... 118 9e-26
UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n... 112 6e-24
UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n... 111 2e-23
UniRef50_UPI00015BB126 Cluster: protein translocase subunit secY... 108 1e-22
UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n... 108 1e-22
UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=... 107 3e-22
UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=... 104 2e-21
UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=... 103 3e-21
UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1; ... 100 3e-20
UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2; ... 100 6e-20
UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n... 100 6e-20
UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=... 99 1e-19
UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=... 97 3e-19
UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=... 96 6e-19
UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7; Sac... 95 1e-18
UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=... 95 2e-18
UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytic... 91 2e-17
UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=... 91 2e-17
UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=... 91 2e-17
UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=... 90 4e-17
UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=... 87 3e-16
UniRef50_A3GFV9 Cluster: Protein involved in co-translational pa... 87 5e-16
UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=... 82 1e-14
UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa... 75 1e-12
UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit co... 74 3e-12
UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3; ... 72 1e-11
UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:... 57 3e-07
UniRef50_O13579 Cluster: Putative uncharacterized protein YLR379... 52 2e-05
UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136, w... 46 0.001
UniRef50_A1RJU5 Cluster: Putative uncharacterized protein; n=7; ... 38 0.28
UniRef50_Q839E4 Cluster: Preprotein translocase, SecY subunit; n... 36 0.85
UniRef50_A1S616 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q6NGC5 Cluster: Phospho-N-acetylmuramoyl-pentapeptide-t... 35 2.0
UniRef50_Q084M0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A7N5J2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_P27148 Cluster: Preprotein translocase subunit secY; n=... 34 3.4
UniRef50_Q4REW5 Cluster: Chromosome 13 SCAF15122, whole genome s... 33 4.5
UniRef50_Q6KI36 Cluster: Preprotein translocase secY subunit; n=... 33 6.0
UniRef50_Q3W8J5 Cluster: Regulatory protein, TetR; n=1; Frankia ... 33 6.0
UniRef50_Q18CH6 Cluster: Preprotein translocase SecY subunit pre... 33 6.0
UniRef50_A0KWF5 Cluster: Putative uncharacterized protein; n=4; ... 33 7.9
UniRef50_P38375 Cluster: Preprotein translocase subunit secY; n=... 33 7.9
>UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit
alpha isoform 2; n=176; Eukaryota|Rep: Protein transport
protein Sec61 subunit alpha isoform 2 - Homo sapiens
(Human)
Length = 476
Score = 314 bits (770), Expect = 2e-84
Identities = 147/159 (92%), Positives = 156/159 (98%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 356
MGIKFLEVIKPFC++LPEI KPERKIQFR KVLWTAITLFIFLVCCQIPLFGIMSSDSAD
Sbjct: 1 MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 60
Query: 357 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAXKLFG 536
PFYW+RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGA KLFG
Sbjct: 61 PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG 120
Query: 537 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAG 653
M+IT+GQAIVYVMTGMYG+P+E+GAG+CLLIIIQLFVAG
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAG 159
>UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4;
Eukaryota|Rep: Protein transporter, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 478
Score = 235 bits (574), Expect = 9e-61
Identities = 107/159 (67%), Positives = 134/159 (84%), Gaps = 1/159 (0%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 356
MG +FLE+++PF SILPE+ PE+K+ F K+ WTA+TL IFLVC Q+PL+GIMSSDS+D
Sbjct: 1 MGFRFLELVRPFMSILPEVTAPEKKVVFNHKIAWTAVTLLIFLVCSQVPLYGIMSSDSSD 60
Query: 357 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAXKLF 533
P YW+R ILASNRGTLMELGI+PIVTSG+IMQLLAGA++I+V + K DRALF A KLF
Sbjct: 61 PLYWLRAILASNRGTLMELGITPIVTSGMIMQLLAGAQLIDVDFSLKDDRALFGAAQKLF 120
Query: 534 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVA 650
M+I++GQA VYV+TG+YG PS +GAGVCLL+I+QL A
Sbjct: 121 AMIISLGQATVYVLTGLYGSPSSLGAGVCLLLILQLVSA 159
>UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=11; Eukaryota|Rep: Chromosome
undetermined scaffold_28, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 474
Score = 192 bits (467), Expect = 8e-48
Identities = 87/153 (56%), Positives = 119/153 (77%), Gaps = 1/153 (0%)
Frame = +3
Query: 186 KFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 365
K L ++P +I+P++A+PER+I F+ + LWTAI ++L+C QIPL+GI S + DPFY
Sbjct: 6 KILNYMRPAMAIIPDVAEPERRILFKYRALWTAIATLLYLICSQIPLYGIYKSSAGDPFY 65
Query: 366 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAXKLFGMV 542
W+RVILASNRGTLMELGISP+VT+ +IMQLLAGAK+I+V K D+ L++GA KL G++
Sbjct: 66 WMRVILASNRGTLMELGISPMVTASMIMQLLAGAKLIDVDQNVKEDKQLYSGAQKLLGIL 125
Query: 543 ITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 641
I G+A YV +GMYG+ ++GAG +LIIIQL
Sbjct: 126 IAFGEAFAYVWSGMYGDLDKLGAGNAILIIIQL 158
>UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 377
Score = 190 bits (464), Expect = 2e-47
Identities = 90/157 (57%), Positives = 123/157 (78%), Gaps = 1/157 (0%)
Frame = +3
Query: 180 GIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 359
G + L +++PF + LPE+ +RKI FR KV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 360 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAXKLFG 536
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGA KL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 537 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFV 647
++I +G+A+ YV++GMYG S + V LL + +F+
Sbjct: 124 ILIAIGEAVAYVLSGMYG--SNLPNVVNLLATVLVFL 158
>UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Preprotein translocase, SecY subunit
containing protein - Tetrahymena thermophila SB210
Length = 551
Score = 186 bits (453), Expect = 4e-46
Identities = 88/176 (50%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Frame = +3
Query: 135 VNILVRIVKSQ*IKMGI-KFLEVIKPFCSILPEIAKPERKI-QFRXKVLWTAITLFIFLV 308
+ IL I K + IK + + LE++ P +++PE+ KP +KI FR + +WTAI + I+LV
Sbjct: 61 IKILQYIKKRKTIKQNMSRILEILAPAINLIPEVEKPIKKILPFRSRAMWTAIVILIYLV 120
Query: 309 CCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG- 485
QIPLFG++S+ ADPFYW+RVILASNRGT+MELGISP VT+G++MQLL GA+I+ +
Sbjct: 121 ASQIPLFGVVSNAGADPFYWLRVILASNRGTIMELGISPTVTAGMVMQLLVGAQILNIDQ 180
Query: 486 DTPKDRALFNGAXKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAG 653
+ P R+L+ G+ KL G++I +A+ YV +GMYG+ ++G G LLI++QL AG
Sbjct: 181 NDPVQRSLYEGSQKLLGLIIAFFEAVAYVWSGMYGDIEKVGYGNALLIVLQLTFAG 236
>UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamoeba
histolytica HM-1:IMSS|Rep: Sec61 alpha subunit -
Entamoeba histolytica HM-1:IMSS
Length = 447
Score = 134 bits (324), Expect = 2e-30
Identities = 74/159 (46%), Positives = 101/159 (63%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 356
MG+ F VI+P S++P I +P +KI F+ K++WT ITL +FLVC QIPL G + D
Sbjct: 1 MGV-FFNVIRPIVSLIPTINEPTKKIGFKEKLMWTGITLLVFLVCSQIPLIGTDIVGN-D 58
Query: 357 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAXKLFG 536
PFYW+R+++ASNRG+LMELGISPIVT+ ++MQLL GAKII V ++ ++
Sbjct: 59 PFYWMRLVMASNRGSLMELGISPIVTASMVMQLLQGAKIISVDMDNQEERMY-------- 110
Query: 537 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAG 653
G+PSE+G C LI++QLFVAG
Sbjct: 111 -----------------GDPSELGFFNCCLILLQLFVAG 132
>UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_10951_12423 - Giardia lamblia
ATCC 50803
Length = 490
Score = 124 bits (300), Expect = 1e-27
Identities = 57/160 (35%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Frame = +3
Query: 174 KMGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSA 353
+M +L+V+ P+ +LP + K + ++F K L+T + L ++L Q+PL+G+ SS
Sbjct: 18 RMVATWLKVLDPWARMLPSVEKAPKTVRFTTKGLYTFLALIVYLTASQVPLYGLHSSIRK 77
Query: 354 DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKL 530
DP +W+R I A RG+LMELGI P +TS +++L +K++ + + +FN L
Sbjct: 78 DPLFWLRSIFAGQRGSLMELGIGPTITSSFFLKILISSKVLPFDKNNEVESQVFNRVQNL 137
Query: 531 FGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVA 650
G + T QA++YV+ G+YG S+IG + II QL ++
Sbjct: 138 IGFIFTFFQAVLYVLAGIYGSISQIGLFSAVAIIAQLTIS 177
>UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit,
putative; n=5; Trichomonas vaginalis G3|Rep: Preprotein
translocase, SecY subunit, putative - Trichomonas
vaginalis G3
Length = 484
Score = 118 bits (285), Expect = 9e-26
Identities = 58/156 (37%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 356
MG L+ I+P ++P + +P +K+ R ++ +T +L ++L+C +PL+G+ + D
Sbjct: 1 MGFDILKSIRPVLELMPNVPRPNKKVPIRKRLFYTFASLAVYLICTLVPLYGVQKTAGDD 60
Query: 357 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAXKLF 533
P +R++ AS++ +LME GISPIVTSG+I+Q L +I + P+ ALF+ A KL
Sbjct: 61 PMQHLRILTASSKYSLMEFGISPIVTSGMILQFLCSFGLINRNPSDPEASALFDAAQKLA 120
Query: 534 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 641
G+++T QA + +G YG EIG LI+ QL
Sbjct: 121 GIIMTAFQAGNAIWSGEYGIRGEIGFVNAALIMTQL 156
>UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n=1;
Thermofilum pendens Hrk 5|Rep: Preprotein translocase,
SecY subunit - Thermofilum pendens (strain Hrk 5)
Length = 476
Score = 112 bits (270), Expect = 6e-24
Identities = 62/161 (38%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGI--MSSDS 350
MG+K E + LPEI KP RK ++LWTA+ L + V Q PL+GI + +
Sbjct: 1 MGLK--ESLDSVFRFLPEIEKPRRKPPLSERLLWTALVLVAYFVMGQTPLYGIPRQTQGT 58
Query: 351 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXK 527
++RV++AS RGTL+ELGI PIVTSG++ +LL G++I+ + TP+ R F G K
Sbjct: 59 LGALEFLRVVMASKRGTLIELGIGPIVTSGIVWELLVGSRIVNLDLTTPEGRRTFAGLQK 118
Query: 528 LFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVA 650
L + +A Y++ G+YG ++ +++ +QLFVA
Sbjct: 119 LTAFLFAALEAAAYILGGVYGALTQQQQ---IIVFVQLFVA 156
>UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n=1;
Staphylothermus marinus F1|Rep: Preprotein translocase,
SecY subunit - Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1)
Length = 476
Score = 111 bits (266), Expect = 2e-23
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Frame = +3
Query: 192 LEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWI 371
++++ +P + KP+ K ++LWTAI L ++++ PL+GI + +
Sbjct: 4 IDLMAKIADYIPTVEKPKAKPGLYERLLWTAIALIVYVIMANTPLYGISVTGGGQQILLV 63
Query: 372 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMVIT 548
++I AS RGTLMELGI PIVT+GLIMQ+L GAK+I + P DR F A K F +++
Sbjct: 64 QIIFASRRGTLMELGIGPIVTAGLIMQILVGAKMINLDMSNPDDRRRFTAAQKTFALILA 123
Query: 549 VGQAIVYVMTGMYGEPS 599
+A +YV Y P+
Sbjct: 124 AFEAAMYVSACRYWTPT 140
>UniRef50_UPI00015BB126 Cluster: protein translocase subunit
secY/sec61 alpha; n=1; Ignicoccus hospitalis KIN4/I|Rep:
protein translocase subunit secY/sec61 alpha -
Ignicoccus hospitalis KIN4/I
Length = 479
Score = 108 bits (260), Expect = 1e-22
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 356
+G K LEV+ + +P + +P+RKI ++ WTA+ L +L+ IPL G+ S +
Sbjct: 4 LGRKALEVLAEIGTYVPAVPRPKRKINLYKRLTWTALALVAYLMMSNIPLPGVSVQTSFN 63
Query: 357 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAXKLF 533
+ ++ A+N GTLM+LGI PIVT+GL++QLL GAKII++ T P+D+ LF A K F
Sbjct: 64 -LLLMNIVFAANAGTLMQLGIGPIVTAGLVLQLLVGAKIIDLDLTDPEDKKLFTLAQKGF 122
Query: 534 GMVITVGQAIVYVMTG 581
+V+ V +AI V++G
Sbjct: 123 AVVLAVFEAIGLVLSG 138
>UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n=2;
Methanococcus|Rep: Preprotein translocase, SecY subunit
- Methanococcus aeolicus Nankai-3
Length = 443
Score = 108 bits (260), Expect = 1e-22
Identities = 53/136 (38%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Frame = +3
Query: 186 KFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 365
+FL+ I+P +PE+ +P R+I F+ K+ WTA+ L ++ + I ++ ++ A F
Sbjct: 3 EFLKKIRPILEYIPEVQRPIREITFKEKLKWTALVLIVYFLMGTIDIYTAGATIPAQ-FE 61
Query: 366 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMV 542
+++ I AS GTL+ LGI PIVT+G+IMQLL G+++I++ P++RA F G KLFG+
Sbjct: 62 YLQTIFASKIGTLITLGIGPIVTAGIIMQLLVGSELIKLDLSKPENRASFQGLQKLFGIF 121
Query: 543 ITVGQAIVYVMTGMYG 590
+ +AI++V G +G
Sbjct: 122 LCFMEAIMFVSVGAFG 137
>UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=4;
Thermococcaceae|Rep: Preprotein translocase subunit secY
- Pyrococcus furiosus
Length = 468
Score = 107 bits (256), Expect = 3e-22
Identities = 48/145 (33%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Frame = +3
Query: 225 PEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTL 404
PE+ +P+R++ R + +WT + L ++ V +IP++GI D F ++RV+LA G++
Sbjct: 15 PEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERIQ-DYFQFLRVVLAGRNGSI 73
Query: 405 MELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMVITVGQAIVYVMTG 581
+ LGI PIVT+G+I+QLL G++II++ P+DR + ++F + + +A V+++ G
Sbjct: 74 LTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWILGG 133
Query: 582 MYGEPS-EIGAGVCLLIIIQLFVAG 653
+G ++ + +L+I+QL + G
Sbjct: 134 AFGRVGVDVTYAIAVLMILQLAMGG 158
>UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=10;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Methanococcus vannielii
Length = 438
Score = 104 bits (249), Expect = 2e-21
Identities = 50/148 (33%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Frame = +3
Query: 201 IKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVI 380
IKP ++PE+ +P + + F+ K+ WT + L ++ + I ++ + ++ F + + +
Sbjct: 3 IKPILELIPEVKRPLKGVSFKEKIQWTGLVLILYFILGTIDIY-MGGAEMPAMFAFWQTV 61
Query: 381 LASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMVITVGQ 557
AS GTL+ LGI PIVT+G+IMQLL G+++I + P +RALF G KLFG+ + +
Sbjct: 62 TASKMGTLITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQKLFGIFLCFLE 121
Query: 558 AIVYVMTGMYGEPSEIGAGVCLLIIIQL 641
A+++V G +G + + + L++++QL
Sbjct: 122 AVMFVGAGAFG---VVNSTLALILVLQL 146
>UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=2;
Thermoprotei|Rep: Preprotein translocase secY subunit -
Cenarchaeum symbiosum
Length = 478
Score = 103 bits (248), Expect = 3e-21
Identities = 58/156 (37%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
Frame = +3
Query: 186 KFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 365
K + V +P+ LP++ KP++K+ + ++LW + L I++V Q PLFG + D
Sbjct: 12 KMVLVAEPY---LPQVPKPKKKLSLQTRLLWCGLALLIYMVMAQTPLFGATVPEF-DFLA 67
Query: 366 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMV 542
+ RVI AS +GTL+ELGI PIVT+GL+MQLL G++I++ P++R +F A K+ V
Sbjct: 68 FARVIFASQQGTLVELGIGPIVTAGLLMQLLRGSEILKFDFKKPEERGIFQTATKMVSYV 127
Query: 543 ITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVA 650
+ V ++ +Y + +YG P V ++I QL +
Sbjct: 128 VIVVESSIYGI-AVYG-PGIADPSVLYILIGQLMAS 161
>UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C19G7.17 - Schizosaccharomyces pombe (Fission yeast)
Length = 475
Score = 100 bits (240), Expect = 3e-20
Identities = 52/159 (32%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
Frame = +3
Query: 180 GIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 359
G +F+ IKP S+LPE+ P+ ++ K+ W A + ++ + IP++G +D+ DP
Sbjct: 3 GARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLDP 62
Query: 360 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFG 536
RV+ S+ LM G++PI S ++Q+LA K I V + DR LF A K+
Sbjct: 63 INNFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVVS 122
Query: 537 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAG 653
++ + A+ YV +G YG S++G +++I+Q+F+ G
Sbjct: 123 ALLYLILAVTYVSSGYYGSFSDLGIFRFIMLILQIFLPG 161
>UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2;
Apansporoblastina|Rep: ER PROTEIN-TRANSLOCATION COMPLEX
- Encephalitozoon cuniculi
Length = 410
Score = 99.5 bits (237), Expect = 6e-20
Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Frame = +3
Query: 369 IRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAXKLFGMVI 545
+R ++ASNRGTLM+LG SP+VTS LIMQ L ++I++V + K D+ L N +L +++
Sbjct: 1 MRAMMASNRGTLMDLGTSPVVTSSLIMQFLTMSEILKVDWSIKEDKNLHNATQRLISLIM 60
Query: 546 TVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAG 653
TVGQA+V V TG YG P +G CLL+++QL +G
Sbjct: 61 TVGQALVQVYTGFYGSPKSLGTIYCLLLVVQLIFSG 96
>UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n=6;
Euryarchaeota|Rep: Preprotein translocase, SecY subunit
- Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 537
Score = 99.5 bits (237), Expect = 6e-20
Identities = 60/152 (39%), Positives = 87/152 (57%), Gaps = 4/152 (2%)
Frame = +3
Query: 189 FLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYW 368
F I+PF LP + +P + F+ K+ WT L ++ V IPLFG+ S S D F +
Sbjct: 6 FFYAIEPFVRRLPAVERPAGHVHFKRKLGWTVGILLLYFVLSNIPLFGL-SKHSIDLFGY 64
Query: 369 IRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMVI 545
R A + G+LM LGI PIVT+ +++QLL GA+II++ P+D+A+F G K V+
Sbjct: 65 YRAFFAGSFGSLMLLGIGPIVTASIVLQLLVGAEIIKLNLRDPRDQAIFQGTQKALVFVM 124
Query: 546 TVGQAIVYVMTGMYGEPSEIGA---GVCLLII 632
V +A+ + TG Y P + A GV L II
Sbjct: 125 IVVEALPQI-TGGYLLPDQALATSLGVSLSII 155
>UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=1;
Aeropyrum pernix|Rep: Preprotein translocase subunit
secY - Aeropyrum pernix
Length = 457
Score = 98.7 bits (235), Expect = 1e-19
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 356
MG+ ++V+ P + KPERK ++ WT + L ++ + IPL+GI +
Sbjct: 1 MGV--IDVLAAVGERFPAVRKPERKPTLYRRLAWTGVILVLYFIMSNIPLYGIPPQNIGG 58
Query: 357 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLF 533
R+I AS+ GTLMELGI PIVT+ LI+Q+L GAKII++ P+ R F A K+
Sbjct: 59 QVDLQRIIFASSAGTLMELGIGPIVTASLIIQVLVGAKIIKLDLADPEGRRKFTSAQKVL 118
Query: 534 GMVITVGQAIVYVMTGMY--GEPSEIGAGVCLLIIIQLFV 647
+ +A+ + + G Y G E G L+ +QLF+
Sbjct: 119 ALAFAALEAVAFTVGGRYWVGTAIEPGPLDYALVSLQLFL 158
>UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=1;
Hyperthermus butylicus DSM 5456|Rep: Preprotein
translocase subunit secY - Hyperthermus butylicus
(strain DSM 5456 / JCM 9403)
Length = 464
Score = 97.1 bits (231), Expect = 3e-19
Identities = 47/134 (35%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
Frame = +3
Query: 177 MGIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD 356
MG+ LEV+ +P AKP R+ +++WT + + ++L+ +IPL G+ A
Sbjct: 1 MGV--LEVLAEVSRYIPAAAKPARRPTLPTRLMWTGLVVLLYLIMSEIPLVGVYGYGQAT 58
Query: 357 PFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAXKLF 533
+ ++L N GTLM LGI PIVT+G+++++L G K+IE+ T P+DR +F GA +
Sbjct: 59 QATLMSMLLGMNIGTLMTLGIGPIVTAGIVLEVLVGGKLIELDLTKPRDRKIFMGAQRTL 118
Query: 534 GMVITVGQAIVYVM 575
++ + +A YV+
Sbjct: 119 ALLFALLEAAAYVI 132
>UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=1;
Caldivirga maquilingensis IC-167|Rep: Preprotein
translocase secY subunit - Caldivirga maquilingensis
IC-167
Length = 482
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/154 (29%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 186 KFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 365
+F+E+++P +++P + +P R + +++WT + ++L+ PL+GI++S S+ F
Sbjct: 5 RFIEMVEPLLTLMPTVPRPNRPVTLGSRLIWTFLAATVYLLLSVTPLYGIVASSSSPLFN 64
Query: 366 -WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGM 539
+ +I AS GTL +LGI PI+ +G+IM+L+A +++++V + PKD+A F KL +
Sbjct: 65 PLVAIIFASTNGTLAQLGIGPIIIAGIIMELVAFSELMDVDLNDPKDQARFTALTKLVAV 124
Query: 540 VITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQL 641
+I + + + T + + AG+ ++ +Q+
Sbjct: 125 IIAMFEGAFIMST---HQLTVANAGLAFIVWLQM 155
>UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7;
Saccharomycetales|Rep: Sec sixty-one protein homolog -
Saccharomyces cerevisiae (Baker's yeast)
Length = 490
Score = 95.5 bits (227), Expect = 1e-18
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Frame = +3
Query: 180 GIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSA-- 353
G + ++++KP ILPE+ P K+ F K+++T I+L Q PL G+ + +
Sbjct: 3 GFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLFA-QFPLVGLPKATTPNV 61
Query: 354 -DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXK 527
DP Y++R + TL+E G+ P ++SGLI+QLLAG K+I+V DR LF K
Sbjct: 62 NDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTK 121
Query: 528 LFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAG 653
+F +V V +++ G +G+ ++ LI QL AG
Sbjct: 122 VFAIVQYVILTNIFIFAGYFGD--DLSVVQIGLINFQLVGAG 161
>UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=44;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Archaeoglobus fulgidus
Length = 493
Score = 94.7 bits (225), Expect = 2e-18
Identities = 52/162 (32%), Positives = 88/162 (54%), Gaps = 8/162 (4%)
Frame = +3
Query: 192 LEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWI 371
+ ++P+ +P + +P+ + FR K WTA L ++ + +P+FG+ S +S D F
Sbjct: 5 IRALQPYFERIPSVERPKGHVHFREKFGWTAAILLLYFILSNVPVFGL-SPESIDIFAAY 63
Query: 372 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAXKLFGMVIT 548
R + A + G+++ LGI PIVT+ +I+QLL GA II++ T P+DRA + + V+
Sbjct: 64 RALFAGSTGSIIALGIGPIVTASIILQLLVGAGIIKLDLTNPEDRAAYQDFQRFLVFVMI 123
Query: 549 VGQAIVYVMTGMYGEPSEIGAG-------VCLLIIIQLFVAG 653
+AI + G+ + A + LI IQLF+ G
Sbjct: 124 AVEAIPQIAGGLLKPDLNLAAQLGVSPGIISFLIFIQLFIGG 165
>UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 485
Score = 91.5 bits (217), Expect = 2e-17
Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Frame = +3
Query: 249 KIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPI 428
++ F K+ +T F + IPL+G +S S DP+ + R I AS+ GTLMELG+ P+
Sbjct: 35 QLPFYDKIAYTVGIAITFFIMAGIPLYGAHASTS-DPYSFTRAISASSHGTLMELGVGPM 93
Query: 429 VTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMVITVGQAIVYVMTGM-YG---- 590
VTSG+I Q+L G + + V D DR LF K+F +++T AI V YG
Sbjct: 94 VTSGIIFQILGGFQALNVNFDIRADRELFQSGQKIFALLLTFFHAIFLVFFAQTYGTIST 153
Query: 591 --EPSEIGAGVCLLIIIQLFVAG 653
SE+ G +LI+ QL AG
Sbjct: 154 DSAVSELSLGAAVLIVAQLTAAG 176
>UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=4;
Sulfolobaceae|Rep: Preprotein translocase subunit secY -
Sulfolobus solfataricus
Length = 469
Score = 91.5 bits (217), Expect = 2e-17
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Frame = +3
Query: 183 IKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPF 362
+ F++ + LP + KP+ K K++W+ + + I+L+ PL+GI S+
Sbjct: 1 MSFIDSLATLGQYLPAVTKPKEKPSLGQKLVWSLVAVIIYLIMASTPLYGITSASFFKNL 60
Query: 363 YWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXK-LFG 536
++I AS GTL +LGI PI+T+GLIMQ+LAG+K+I + + P DR F A K L
Sbjct: 61 ILEQIIFASTTGTLAQLGIGPIITAGLIMQILAGSKLISIDLNDPDDRVKFTEAQKGLAF 120
Query: 537 MVITVGQAIV-YVMTGMYGEPSEIGAGVCLLIIIQLFVA 650
+ I V A+ YV+ + + ++I QL VA
Sbjct: 121 IFILVESALFGYVLARTSTTINASILFIAGIVIAQLIVA 159
>UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=4;
Methanomicrobiales|Rep: Preprotein translocase secY
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 479
Score = 91.1 bits (216), Expect = 2e-17
Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 10/166 (6%)
Frame = +3
Query: 186 KFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 365
+ L+ ++P + +P + PE + F+ K+ WTA L ++ IP+FG+ S +S D F
Sbjct: 3 EILDRMEPILAKMPAVKTPEGHVHFKNKLAWTAAILILYFALTNIPVFGL-SPESQDMFQ 61
Query: 366 WIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRA--LFNGAXKLFGM 539
+ R +LA + G+++ LGI PIVT+ +++QLL GA +I + DT + R + G KL
Sbjct: 62 YFRALLAGSSGSIVHLGIGPIVTASIVLQLLKGADLIHI-DTSEIRGQIQYMGLQKLMIF 120
Query: 540 VITVGQAIVYVMTG-MYGEPSEIGA------GV-CLLIIIQLFVAG 653
++ V +A+ ++ G + +P+ A GV +LI IQ+ + G
Sbjct: 121 IMIVVEALPMIVGGFLKPDPAIASALFGGNSGVLAILIFIQICIGG 166
>UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=5;
Thermoplasmatales|Rep: Preprotein translocase secY
subunit - Picrophilus torridus
Length = 587
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +3
Query: 222 LPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGT 401
LP I K + + F+ K++WT + + ++ I ++G+ D+ D F R I A G+
Sbjct: 75 LPAIKKAKGHVPFKYKLMWTGLIVILYFALTNIYIYGLNVKDTVDVFAAFRAIFAGASGS 134
Query: 402 LMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAXKLFGMVITVGQAI 563
LM+LGI PIVT+ ++MQL AGAKI + T P D+A++ G KL +++ +AI
Sbjct: 135 LMDLGIGPIVTASIVMQLFAGAKIFNLDLTNPDDKAIYQGVQKLLVIIMIFVEAI 189
>UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=2;
environmental samples|Rep: Preprotein translocase
subunit SecY - uncultured marine group II euryarchaeote
HF70_59C08
Length = 604
Score = 87.4 bits (207), Expect = 3e-16
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Frame = +3
Query: 201 IKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVI 380
+K + P I KPE ++F K+ T L I+ + ++G+ S + D F R I
Sbjct: 96 LKRLVDVYPSITKPEGHVRFNSKLWTTTFVLIIYFAMTNVMIWGL-SEATIDVFSSFRAI 154
Query: 381 LASNRGTLMELGISPIVTSGLIMQLLAGAKII--EVGDTPKDRALFNGAXKLFGMVITVG 554
+A G++M LGI PIVT +IMQL AGAKII ++GD+ D+ L+ G K+ +++
Sbjct: 155 MAGASGSIMHLGIGPIVTGSIIMQLFAGAKIIKLDLGDS-DDKQLYQGVQKILVLIMIPV 213
Query: 555 QAIVYVMTGMYGEP---SEIGAGVCLLIII-QLFV 647
++I V + P S+ G G II+ QLF+
Sbjct: 214 ESIPQVYGFLDASPALVSDFGQGWANAIIVSQLFI 248
>UniRef50_A3GFV9 Cluster: Protein involved in co-translational
pathway of protein transport; n=6;
Saccharomycetales|Rep: Protein involved in
co-translational pathway of protein transport - Pichia
stipitis (Yeast)
Length = 501
Score = 86.6 bits (205), Expect = 5e-16
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Frame = +3
Query: 180 GIKFLEVIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDS--- 350
G + L+++K F +LPE+ P I F ++++T + I+LV QIP++G++ +
Sbjct: 3 GFRLLDLVKFFLPVLPEVEWPVEAISFDERIVFTVGSGIIYLVG-QIPIYGLVPNAQFKI 61
Query: 351 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXK 527
DPF+ R + A +GTL ELG+ P+VT+ QL G K++ V DR LF K
Sbjct: 62 EDPFFSFRSVFAMEKGTLFELGVLPVVTAAFFWQLAVGLKLVNVNLGLRSDRELFQTGQK 121
Query: 528 LFGMVITVGQAIVYVMTGMY 587
L V+ + + + +G Y
Sbjct: 122 LTSFVLAIVYGVGLIYSGYY 141
>UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=4;
Pyrobaculum|Rep: Preprotein translocase secY subunit -
Pyrobaculum aerophilum
Length = 459
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/151 (27%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Frame = +3
Query: 210 FCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIM--SSDSADPF-YWIRVI 380
F +++P +++P R++ ++ WTA+ ++++ PL+G+ + P + +I
Sbjct: 4 FLTLIPTVSRPPRRLPLSKRLFWTAVVAIVYIMMTITPLYGVQHTTQQGTQPLQQLLSII 63
Query: 381 LASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMVITVGQ 557
+ GTL LGI PIV +G+++++ A + I+ + + +DR F K + I +
Sbjct: 64 FGTAYGTLAHLGIGPIVIAGILLEVFAFSGILNLDLNKREDRLKFTLLLKWTALGIAAVE 123
Query: 558 AIVYVMTGMYGEPSEIGAGVCLLIIIQLFVA 650
A+ YV++G +G + +G LLI++QL +A
Sbjct: 124 AVAYVLSGQFGPVTPLGG---LLIVLQLLIA 151
>UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 546
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Frame = +3
Query: 252 IQFRXKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 419
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 420 SPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAXKLFGMVITVGQAIVYVMTGMYGEPS 599
P++ S + +++ + +I P N A KL + + + A+ V++ G +
Sbjct: 75 IPLLLSEMAVRIFSA--LIITRWPPFHHVRLNRARKLLAIAMAMVMAVSGVLSA--GVAA 130
Query: 600 EIGAGVCLLIIIQLFVAG 653
E+G L+++ QLF+ G
Sbjct: 131 ELGTMASLVVMFQLFLGG 148
>UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0512000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 466
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Frame = +3
Query: 216 SILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSD---SADPFYWIRVILA 386
+++PE+ P++ I R K +TAI LFIF+ Q+ L+GI DP +W+ +ILA
Sbjct: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
Query: 387 SNRGTLMELGISPIVTSGLIMQLLAGAKIIEVG-DTPKDRALFNGAXKLFGMVITVGQAI 563
S+R TL+ GI I+ +++++ KII + P+ L N A +L G+++ + A+
Sbjct: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
Query: 564 VYVMTGMY 587
+ + +
Sbjct: 132 NFYVRSQH 139
>UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit
containing protein; n=3; Oryza sativa|Rep: Preprotein
translocase, SecY subunit containing protein - Oryza
sativa subsp. japonica (Rice)
Length = 461
Score = 73.7 bits (173), Expect = 3e-12
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Frame = +3
Query: 180 GIKFLEVIKPFCSILPEIAKP-ERKIQFRXKVLWTAI-TLFIFLVCCQIPLFGIMSSDSA 353
G +++P + P + + E + FR +V TA +L + L +PL+
Sbjct: 13 GTALWRLLRPLAVLGPRMQRRREAAVPFRGQVRNTAAASLLLLLSLSHVPLYAGAGDADP 72
Query: 354 DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAXKLF 533
DP +W R +LA+ RGT+MELG++P+VTS ++++LLA ++ D+ A +
Sbjct: 73 DPLFWARPLLAAPRGTVMELGVAPVVTSWVVVRLLAA--LLFDSDSSTTVASCELLARCL 130
Query: 534 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAG 653
V + ++ + + G GAG L+++QLF G
Sbjct: 131 AYVTNASRLVIGIAAAL-GMCGSGGAGNAALVVLQLFAGG 169
>UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 384
Score = 72.1 bits (169), Expect = 1e-11
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Frame = +3
Query: 252 IQFRXKVLWTAITLFIFLVCCQIPLFGIMS---SDSADPFYWIRVILASNRGTLMELGIS 422
+ FR KVL+TA++L +FLV ++ L+G+ + DP YW+ + AS R T+M LG+
Sbjct: 33 VSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWMNAMSASLRPTVMALGLV 92
Query: 423 PIVTSGLIMQLLAGAKIIEVGD--TPKDRALFNGAXKLFGMVITVGQ--AIVYVMTGMYG 590
P++ S +++ L KII V D P R +LF M I + AIV + + G
Sbjct: 93 PLLYSEMVVHLCMALKIIGVHDDRLPDHRRRLERTRRLFAMQIAIVSPVAIVLYASAIAG 152
Query: 591 EPSEIGAGVCLLIIIQLFVAG 653
I L+ + QL G
Sbjct: 153 GTPFI-TTAALVFVFQLIAGG 172
>UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:
NEQ168 - Nanoarchaeum equitans
Length = 476
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Frame = +3
Query: 198 VIKPFCSILPEIAKPERKIQFRXKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRV 377
+++ LP I KP+ ++ W+AI + ++L+ PL G+ S A F + V
Sbjct: 4 IVEKVVQKLPTIKKPKYLTNL-DRLKWSAIAVILYLLLSYTPLIGV-SQTGAGVFEELVV 61
Query: 378 ILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKD-RALFNGAXKLFGMVITVG 554
+L ++ G+++ LGI PI+ L+ +L G+ + + T ++ + F + F +V +
Sbjct: 62 LLGASFGSIVSLGIGPIIIGYLLAELFIGSGELNIDITTEEGKRKFENLARFFMIVFGLF 121
Query: 555 QAIVYVMTGMYGEPSE 602
++IV G + +PS+
Sbjct: 122 ESIVMATIGWF-KPSQ 136
>UniRef50_O13579 Cluster: Putative uncharacterized protein YLR379W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YLR379W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 124
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/79 (39%), Positives = 40/79 (50%)
Frame = -2
Query: 427 IGEIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGIWQHTKKINNVIAVHNTFXRN*IL 248
+GE P+S VP +A + R Q +GS +S D IP GIW KKI+ V +F
Sbjct: 2 MGETPNSSKVPRLEASMARSQYRGSEVSLDTIPYSGIWPRIKKISRETPVQISFWLYGTF 61
Query: 247 RSGFAISGNILQNGLITSK 191
SG SG NGL S+
Sbjct: 62 LSGAITSGRKDSNGLNKSR 80
>UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_136,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +3
Query: 381 LASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAXKLFGMVITVGQA 560
+A R T +E G+S +VT+ +I+QL A AK+ +V + + F + + +IT+G+A
Sbjct: 16 IAFKRETQVEFGMSLMVTASMIIQLFAAAKLTDVDQNRRRISNFLRSIDVIENIITLGEA 75
Query: 561 IVYVMTGMYGEPSEIGAGVCLL 626
VYV + +IG C L
Sbjct: 76 FVYVPSRDVWRFGQIGNIQCYL 97
>UniRef50_A1RJU5 Cluster: Putative uncharacterized protein; n=7;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella sp. (strain W3-18-1)
Length = 1305
Score = 37.5 bits (83), Expect = 0.28
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = -2
Query: 478 SMILAPASNCMISPDVTIG------EIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGI 317
++I P + ISPD+T+ E+ ++NVP + +I ++ G ALS+D++ N I
Sbjct: 994 AVIQPPLAILDISPDLTLSFSSEQLEVKGTVNVPSGNIKIVQLAEGGVALSEDVVFNDSI 1053
Query: 316 WQHTKKIN--NVIAVHNTFXRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTI 152
K + ++A N N + G + G + + + F P L++ D+ +
Sbjct: 1054 AAAQPKSSPYAIVADLNINVGNDLRVDGMGLKGKLQGTLKLQQQAFRPPLLFGDIKV 1110
>UniRef50_Q839E4 Cluster: Preprotein translocase, SecY subunit;
n=13; Lactobacillales|Rep: Preprotein translocase, SecY
subunit - Enterococcus faecalis (Streptococcus faecalis)
Length = 432
Score = 35.9 bits (79), Expect = 0.85
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Frame = +3
Query: 261 RXKVLWTAITLFIFLVCCQIPLFGIMSSDSAD----PFY-WIRVILAS--NRGTLMELGI 419
R K+L+T + LF+F + I + G+ + +D PF + ++ S ++ +G+
Sbjct: 15 RSKILFTVLILFVFRLGAHITVPGVNAKGLSDLSSLPFLNMLNMVSGSAMQNFSIFSMGV 74
Query: 420 SPIVTSGLIMQLL 458
SP +T+ +I+QLL
Sbjct: 75 SPYITASIIIQLL 87
>UniRef50_A1S616 Cluster: Putative uncharacterized protein; n=1;
Shewanella amazonensis SB2B|Rep: Putative uncharacterized
protein - Shewanella amazonensis (strain ATCC BAA-1098 /
SB2B)
Length = 1297
Score = 35.1 bits (77), Expect = 1.5
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Frame = -2
Query: 478 SMILAPASNCMISPDVTIG------EIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGI 317
++I+ P + +SPDVT+ ++ S+N+P + +I ++ G A+S D++ + I
Sbjct: 987 AVIVPPMALLDVSPDVTLTFDAAMLDLKGSVNIPTGNIKIVQLAEGGVAVSPDVVFDDSI 1046
Query: 316 WQHTKKIN--NVIAVHNTFXRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTILT 146
+ +K + V A N + + G + G + + + F P L++ D+ +L+
Sbjct: 1047 AEAEQKTSPYGVTADLNIRVGDQVKIEGMGLKGRLDGTLRLQQQAFKPPLLFGDVKVLS 1105
>UniRef50_Q6NGC5 Cluster:
Phospho-N-acetylmuramoyl-pentapeptide-transferase; n=45;
Actinobacteria (class)|Rep:
Phospho-N-acetylmuramoyl-pentapeptide-transferase -
Corynebacterium diphtheriae
Length = 366
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +3
Query: 372 RVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAXKLFGMVITV 551
++I+A G L+ + ++P++ + L G +I E D PK G + G+ I +
Sbjct: 3 QIIIAGAVGLLVSIFVTPVLIRRFSAEGL-GQEIRE--DGPKSHLRKRGTPTMGGIAILI 59
Query: 552 GQAIVYVMTGMYGEPSEIG 608
G + Y +TG+ G+ + G
Sbjct: 60 GITVAYAVTGIVGQVTGTG 78
>UniRef50_Q084M0 Cluster: Putative uncharacterized protein; n=1;
Shewanella frigidimarina NCIMB 400|Rep: Putative
uncharacterized protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 1304
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/115 (20%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = -2
Query: 490 VSPTSMILAPASNCMISPDVTIGEIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGIWQ 311
+ P IL + + ++ D + I ++VP +IT++ G A+S+D++ N + +
Sbjct: 995 IQPPMAILNVSPDINMTFDEQLFAIKGKVDVPSGQIKITQLAEGGVAVSNDVVFNDSVSE 1054
Query: 310 HTKKIN--NVIAVHNTFXRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTI 152
T K + V A N + G + G + + ++ + F P +++ D+ +
Sbjct: 1055 QTVKTSPYAVTADLNISVGKRLTIDGMGLKGRLEGDLILKQQAFKPPMLFGDIKV 1109
>UniRef50_A7N5J2 Cluster: Putative uncharacterized protein; n=1;
Vibrio harveyi ATCC BAA-1116|Rep: Putative
uncharacterized protein - Vibrio harveyi ATCC BAA-1116
Length = 329
Score = 33.9 bits (74), Expect = 3.4
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 276 WTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQL 455
W I IF++ + + + S +A F + ++ + GT MEL ++ +M L
Sbjct: 77 WALIVSSIFVIYSYLRIEKLASFSTAPVFLYCYGLINTTYGTSMELYFYQLLHVAFMMLL 136
Query: 456 LAGAKIIEVGDTPKDRALFNGAXKLF--GMVITVGQAIVYVMTGMYGEPSEIGAGV-CLL 626
LA A I + TP ++ K+ + V I+ ++ +Y E+G + CL
Sbjct: 137 LAKA-IFWILPTPSNQMSSKQNQKVVKRSKALNVISTIIISLSLVYFLSIEVGKAIFCLS 195
Query: 627 IIIQL 641
+II +
Sbjct: 196 VIISI 200
>UniRef50_P27148 Cluster: Preprotein translocase subunit secY; n=52;
cellular organisms|Rep: Preprotein translocase subunit
secY - Lactococcus lactis subsp. cremoris (Streptococcus
cremoris)
Length = 439
Score = 33.9 bits (74), Expect = 3.4
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Frame = +3
Query: 261 RXKVLWTAITLFIFLVCCQIPLFGIMSSDS---AD-PFYWIRVILASN---RGTLMELGI 419
R ++L+T LF+F + I G+ + AD PF + +++ N +L +G+
Sbjct: 16 RARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGNAMQNYSLFAMGV 75
Query: 420 SPIVTSGLIMQLLAG---AKIIEVGDTPK-DRALFNGAXKLFGMVITVGQAI 563
SP +T+ +I+QLL K +E + R N A + +V+ + Q+I
Sbjct: 76 SPYITASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQSI 127
>UniRef50_Q4REW5 Cluster: Chromosome 13 SCAF15122, whole genome
shotgun sequence; n=7; Euteleostomi|Rep: Chromosome 13
SCAF15122, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 825
Score = 33.5 bits (73), Expect = 4.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 70 PKRVCATPPTSCPQMTRPQC 11
PK++C PT+CP M+ P+C
Sbjct: 440 PKKICECDPTACPPMSAPRC 459
>UniRef50_Q6KI36 Cluster: Preprotein translocase secY subunit; n=1;
Mycoplasma mobile|Rep: Preprotein translocase secY
subunit - Mycoplasma mobile
Length = 472
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 267 KVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVI-LASNRG----TLMELGISPIV 431
K+++T L IF + I L G+ S + D ++ ++ L G +++ LGISP +
Sbjct: 39 KIVFTIFLLSIFAIAGSITLPGV-SVGNLDSNTFLGILNLVGGGGLRNFSIVALGISPFI 97
Query: 432 TSGLIMQLL 458
T+ L+MQ+L
Sbjct: 98 TASLVMQIL 106
>UniRef50_Q3W8J5 Cluster: Regulatory protein, TetR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 212
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +3
Query: 333 IMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALF 512
+ + DSA+ W++V+ AS T + LG+S + +G++ + L GA++ + D + L
Sbjct: 110 VAAEDSAEVARWVQVVEASLYATRVMLGVSILEFNGVLAEFL-GARLGKAPDDLEPAMLA 168
Query: 513 NGAXKLFGMVITVGQAIVYVMTG 581
A G +I Q Y++ G
Sbjct: 169 VAA----GAIILAAQTRWYLLGG 187
>UniRef50_Q18CH6 Cluster: Preprotein translocase SecY subunit
precursor; n=1; Clostridium difficile 630|Rep:
Preprotein translocase SecY subunit precursor -
Clostridium difficile (strain 630)
Length = 422
Score = 33.1 bits (72), Expect = 6.0
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Frame = +3
Query: 261 RXKVLWTAITLFIFLVCCQIPLFGIMSS--------DSADPFYWIRVILASNRGTLMELG 416
R KV++T + + IF + IP+ GI +S +S Y + A + +L LG
Sbjct: 15 RKKVMYTLMMIVIFRIGTTIPVPGIDTSIIQKMVGGNSLLSLYNMFTGGAFSNFSLFALG 74
Query: 417 ISPIVTSGLIMQLL 458
ISP +T+ +I+QLL
Sbjct: 75 ISPYITASIIIQLL 88
>UniRef50_A0KWF5 Cluster: Putative uncharacterized protein; n=4;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella sp. (strain ANA-3)
Length = 1449
Score = 32.7 bits (71), Expect = 7.9
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = -2
Query: 478 SMILAPASNCMISPDVTIG------EIPSSINVPLFDARITRIQ*KGSALSDDIIPNKGI 317
++I P + +SPD+TI E+ ++VP + +I ++ G ALS+D++ + I
Sbjct: 1137 AVIQPPLTLLDVSPDLTIAFSSQQLELKGVVDVPSGNIKIVQLAEGGVALSEDVVFDDSI 1196
Query: 316 WQHTKKIN--NVIAVHNTFXRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTI 152
K + ++A N N + G + G + + + F P L++ D+ +
Sbjct: 1197 AAAQPKASPYAIVADLNINVGNDLKVDGMGLKGKLQGTLKLQQQAFRPPLLFGDIKV 1253
>UniRef50_P38375 Cluster: Preprotein translocase subunit secY; n=18;
Firmicutes|Rep: Preprotein translocase subunit secY -
Bacillus halodurans
Length = 430
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +3
Query: 261 RXKVLWTAITLFIFLVCCQIPLFGIMSS-----DSADPFYWIRVILASNRG--TLMELGI 419
R KV++T + L +F + IP+ G D A+ F ++ G ++ +GI
Sbjct: 15 RRKVIFTLLMLIVFRIGSFIPVPGTNREVLDFVDQANAFGFLNTFGGGALGNFSIFAMGI 74
Query: 420 SPIVTSGLIMQLL 458
P +T+ ++MQLL
Sbjct: 75 MPYITASIVMQLL 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,853,798
Number of Sequences: 1657284
Number of extensions: 12266028
Number of successful extensions: 35116
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 33230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35039
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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