Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B14
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82053-9|CAJ85768.1|  189|Caenorhabditis elegans Hypothetical pr...    31   0.51 
Z82053-8|CAB61018.2|  309|Caenorhabditis elegans Hypothetical pr...    31   0.51 
U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin ...    31   0.51 
AF070968-1|AAD15926.1|  309|Caenorhabditis elegans PAR-6 protein.      31   0.51 
Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical pr...    31   0.90 
U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical pr...    31   0.90 
AF024502-4|AAB70374.1|  675|Caenorhabditis elegans Hypothetical ...    31   0.90 
AF024502-3|AAB70373.1|  836|Caenorhabditis elegans Hypothetical ...    31   0.90 
AF024502-1|AAK77624.1|  416|Caenorhabditis elegans Hypothetical ...    31   0.90 
Z81593-11|CAI94505.2|  360|Caenorhabditis elegans Hypothetical p...    29   2.1  
U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z82052-3|CAB04826.1|  363|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81492-6|CAB04034.1|  416|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81542-6|CAE17834.1|  365|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin ...    27   8.4  
AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical ...    27   8.4  

>Z82053-9|CAJ85768.1|  189|Caenorhabditis elegans Hypothetical
           protein T26E3.3b protein.
          Length = 189

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +1

Query: 175 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 318
           +T+K  + R    R  + + T  A E +A  AA T  + RP MKMNGS
Sbjct: 123 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 169


>Z82053-8|CAB61018.2|  309|Caenorhabditis elegans Hypothetical
           protein T26E3.3a protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +1

Query: 175 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 318
           +T+K  + R    R  + + T  A E +A  AA T  + RP MKMNGS
Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289


>U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin
           protein 5 protein.
          Length = 419

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 18/72 (25%), Positives = 33/72 (45%)
 Frame = +3

Query: 108 NGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVS 287
           NG     P   +C    +   +ADN  Y ++     L      ++ A+  C Q C +L S
Sbjct: 137 NGNCESDPRAFVC---ELPATHADNCTYNYNGHCFTLHTERNTFVQAQAICEQECGNLAS 193

Query: 288 LETSDENEWVKA 323
           + +S+EN ++ +
Sbjct: 194 IHSSNENRYLSS 205


>AF070968-1|AAD15926.1|  309|Caenorhabditis elegans PAR-6 protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +1

Query: 175 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 318
           +T+K  + R    R  + + T  A E +A  AA T  + RP MKMNGS
Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289


>Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical
           protein F49A5.2 protein.
          Length = 379

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +3

Query: 246 ARNYCRQRCMDLVSLETSDENEWVKARIVXDKIKYI 353
           A+ +C+ +C +LVS+ +++EN +V++ I  D   YI
Sbjct: 267 AQTFCKTKCANLVSINSANENRYVQS-IYNDTNGYI 301


>Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical
           protein F16H6.1 protein.
          Length = 555

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 246 ARNYCRQRCMDLVSLETSDENEWVKARIVXDKIKYI 353
           A++ C+Q C +LVS+ + +EN +V++    +   YI
Sbjct: 189 AQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224


>U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical
           protein F10G2.3 protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 228 EEDWLSARNYCRQRCMDLVSLETSDENEWV 317
           E  ++ A+N C Q C DL ++ T++EN ++
Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204


>AF024502-4|AAB70374.1|  675|Caenorhabditis elegans Hypothetical
           protein M151.2 protein.
          Length = 675

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = -1

Query: 126 APGCVHW--GTVPGPPPLA--QLIRVLMSSFSRCVQDP 25
           APG ++   G + GPPPL+  QL  +L+ +F+R + DP
Sbjct: 367 APGSLYGLEGMLQGPPPLSQDQLNSILLGAFTRHLSDP 404


>AF024502-3|AAB70373.1|  836|Caenorhabditis elegans Hypothetical
           protein M151.3 protein.
          Length = 836

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = -1

Query: 126 APGCVHW--GTVPGPPPLA--QLIRVLMSSFSRCVQDP 25
           APG ++   G + GPPPL+  QL  +L+ +F+R + DP
Sbjct: 511 APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTRHLSDP 548


>AF024502-1|AAK77624.1|  416|Caenorhabditis elegans Hypothetical
           protein M151.7 protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = -1

Query: 126 APGCVHW--GTVPGPPPLA--QLIRVLMSSFSRCVQDP 25
           APG ++   G + GPPPL+  QL  +L+ +F+R + DP
Sbjct: 52  APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTRHLSDP 89


>Z81593-11|CAI94505.2|  360|Caenorhabditis elegans Hypothetical
           protein T20B3.16 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 246 ARNYCRQRCMDLVSLETSDENEWVKARIVXDKIKYIWTSGRLCD 377
           A+ +C+ +C ++VS+ +++EN +V++ I   K  YI     + D
Sbjct: 258 AQKFCKTKCANVVSINSANENRYVQS-IYYIKDGYITLGAAVLD 300


>U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical
           protein F32E10.3 protein.
          Length = 876

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +3

Query: 219 RGVEEDWLSARNYCRQRCMDLVSLETSDENEWV 317
           R  +++WL+AR +C     DL ++   ++ +W+
Sbjct: 62  RAGDQNWLTAREHCLSLNADLAAIRNVEQLDWI 94


>AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.2 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 9/26 (34%), Positives = 20/26 (76%)
 Frame = +3

Query: 246 ARNYCRQRCMDLVSLETSDENEWVKA 323
           A+  C+ RC +LVS+ +++EN ++++
Sbjct: 253 AQEICKTRCANLVSISSANENRFIRS 278


>Z82052-3|CAB04826.1|  363|Caenorhabditis elegans Hypothetical
           protein T25E12.8 protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 8/27 (29%), Positives = 20/27 (74%)
 Frame = +3

Query: 240 LSARNYCRQRCMDLVSLETSDENEWVK 320
           + A+ +C  +C +LVS+ +++EN +++
Sbjct: 261 VEAQRFCNTKCANLVSIHSANENRFIQ 287


>Z81492-6|CAB04034.1|  416|Caenorhabditis elegans Hypothetical
           protein E03H4.10 protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +3

Query: 171 YADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIVXD 338
           +AD+  Y ++          E ++ A+  C +   DLVS+ +S+EN +++     D
Sbjct: 157 HADDCTYNYNGYCYTFSSTAEPFIIAQTKCAETYGDLVSIHSSNENRYIETFAAQD 212


>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
            ZK512.5 protein.
          Length = 1232

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 105  PNGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGV 227
            PN +   PPVP    +  ++ER A +KG+F S ++  ++ +
Sbjct: 1056 PNAKTTAPPVPQKQPELALNERKA-SKGWFGSIKEKVIKSI 1095


>Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical
           protein B0365.6 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 258 CRQRCMDLVSLETSDENEWVKARIVXDKIKYI 353
           C+Q C +LVS+ + +EN +V++    +   YI
Sbjct: 186 CQQACGNLVSIHSIEENNYVQSLFTTNAPTYI 217


>Z81542-6|CAE17834.1|  365|Caenorhabditis elegans Hypothetical
           protein F49A5.9 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/26 (34%), Positives = 20/26 (76%)
 Frame = +3

Query: 246 ARNYCRQRCMDLVSLETSDENEWVKA 323
           ++ +CR  C +LVS+ +++EN +V++
Sbjct: 263 SQKFCRSICGNLVSITSANENRYVQS 288


>U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin
           protein 6 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 186 GYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARI--VXDKIKYIWT 359
           G+ +S+  PA       +  A+  C Q C +L S+ +S+EN ++ + I  + +K  YI  
Sbjct: 165 GHCYSFHQPAT------FAQAQVICEQECGNLASIHSSNENRYLSSIISSLSNKNYYIGA 218

Query: 360 S 362
           S
Sbjct: 219 S 219


>AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.3 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = +3

Query: 246 ARNYCRQRCMDLVSLETSDENEWVKA 323
           A  +C+  C ++VS+ + DE+ +V++
Sbjct: 256 AHEFCKPMCAEVVSINSGDESRYVQS 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,012,369
Number of Sequences: 27780
Number of extensions: 331556
Number of successful extensions: 853
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)