Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B11
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54864| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_55936| Best HMM Match : Paramecium_SA (HMM E-Value=0.56) 31 1.1
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41) 29 4.4
SB_45198| Best HMM Match : PX (HMM E-Value=2.3e-10) 28 5.8
SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_7746| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_54864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/90 (37%), Positives = 57/90 (63%)
Frame = +1
Query: 382 NAGATVNVVVETVFTKALQPYPTAITXQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKT 561
++G +V+V VE VF A++P+P + + V + GN YT++ Y + Q T++ L++
Sbjct: 83 SSGGSVDVSVEEVFAHAMKPFPAKVAQSDKHQVLFTGNHYTFAVYKSKQQSTTITLSSSN 142
Query: 562 VESFTXVKPFSQVDGTIIYGPYANVGPFTE 651
+ES+T +KP SQ D TI GPY++V F +
Sbjct: 143 IESYTKLKPSSQSDNTITLGPYSDVDAFKQ 172
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 58 TLFFVLFLT--IQTLSASVDTISSDIKLKNVDRTVXISTQLVKVVSKIVLENSGKSSVKH 231
+L FVL I TL+ I+ D+ L R + +S+QLVKV + I L+N G V
Sbjct: 5 SLGFVLLTACYIFTLTPVDADINHDLVLSKASRKIDLSSQLVKVSTSITLDNGGNQPVDS 64
Query: 232 FLFAVEEAAXNNLXFIGAKDSNSKDLRLAE 321
F FAV+ + +NL + A S D+ + E
Sbjct: 65 FHFAVDPSVADNLALLSASSGGSVDVSVEE 94
>SB_55936| Best HMM Match : Paramecium_SA (HMM E-Value=0.56)
Length = 581
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 463 QEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTXVKPFSQVDGT 609
+ +Q +GNL + P+ T + K+++ +++K +SF PFS+ + T
Sbjct: 91 ETNQIPSELGNLKSQDPWNTGSLKSAIGVDSKPSQSFNPETPFSKNEMT 139
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +1
Query: 424 TKALQPYPTAITXQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTXVKPFSQVD 603
T ++P TA + V T P T + TS + T TVE V+P S V+
Sbjct: 86 TNTVEPTSTAEPTNTVEPTNTVEPTSTVEPTNT-VEPTSTVEPTSTVEPTNTVEPTSTVE 144
Query: 604 GTIIYGPYANVGP 642
T P + V P
Sbjct: 145 PTSTVEPTSTVVP 157
>SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41)
Length = 851
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 99 TKGLYRQKQYEKKRKVVTSPLPGNLI 22
T+G + Q Q K++ V TS LPG LI
Sbjct: 166 TRGFFIQMQLSKEQDVDTSSLPGELI 191
>SB_45198| Best HMM Match : PX (HMM E-Value=2.3e-10)
Length = 408
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 55 FTLFFVLFLTIQTLSASVDTISSDIKLKNVD--RTVXISTQLVKVVSK 192
F FV+F+ LSASVD + D +L D + + ++K+V+K
Sbjct: 190 FVYSFVIFMVNSRLSASVDNVLEDDELTFADPLKEYQLFADVLKMVAK 237
>SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 324 HCERL*LC*ILACGAQGTPKRRCHSKCCCRN---CVHQ--SFTTI-SDSYNSXRRPVCEI 485
HC C +C G + C +KC C+N CV++ FT I S +N +CE
Sbjct: 104 HCVDAYKCFRCSCDGTGYYGQTCQNKCPCKNGGHCVNKVDGFTCICSPGFNG---KLCEN 160
Query: 486 CW 491
W
Sbjct: 161 IW 162
>SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 324 HCERL*LC*ILACGAQGTPKRRCHSKCCCRN---CVHQ--SFTTI-SDSYNSXRRPVCEI 485
HC C +C G + C +KC C+N CV++ FT I S +N +CE
Sbjct: 104 HCVDAYKCFRCSCDGTGYYGQTCQNKCPCKNGGHCVNKVDGFTCICSPGFNG---KLCEN 160
Query: 486 CW 491
W
Sbjct: 161 IW 162
>SB_7746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 466 EDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTXVKPFSQVDGTIIYG 621
E++F K +Y+Y+P Y+S +++ V + K + TI+ G
Sbjct: 34 ENKFFKVFRGMYSYTPRYSSPHDRNLLWYHSAVTNIVEYKSMGNLFTTILRG 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,355,488
Number of Sequences: 59808
Number of extensions: 391690
Number of successful extensions: 1102
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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