Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B11
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p pro...   115   7e-26
AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-P...   115   7e-26
BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p pro...    86   3e-17
X51968-1|CAA36226.1|  471|Drosophila melanogaster protein ( Dros...    29   5.6  

>BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p
           protein.
          Length = 464

 Score =  115 bits (276), Expect = 7e-26
 Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
 Frame = +1

Query: 67  FVLFLTIQTLSASVDTISSDIKLKNVDRTVXISTQLVKVVSKIVLENSGKSSVKHFLFAV 246
           FV++L +  L   + T + +I   NV+RT+ +++QLVK  +KI  E+S    +  ++F  
Sbjct: 20  FVIYLALGALLC-LATANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFT 78

Query: 247 EEAAXNNLXFIGAKDSNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVF 423
            E +   L +I  KD++ K +       VKG     F       P  A A    +VETV 
Sbjct: 79  SEPS---LAYIDVKDASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVA 129

Query: 424 TKALQPYPTAITXQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTXVKPFSQVD 603
           +K ++P+P  I   + QFVKY GNL+ YS Y T++QKT+V L++  + S T VKPFS   
Sbjct: 130 SKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSS 189

Query: 604 GTIIYGPYANVGPFTEK 654
             I  GPY NV  F+++
Sbjct: 190 NKITLGPYENVEAFSQE 206


>AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-PA
           protein.
          Length = 458

 Score =  115 bits (276), Expect = 7e-26
 Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
 Frame = +1

Query: 67  FVLFLTIQTLSASVDTISSDIKLKNVDRTVXISTQLVKVVSKIVLENSGKSSVKHFLFAV 246
           FV++L +  L   + T + +I   NV+RT+ +++QLVK  +KI  E+S    +  ++F  
Sbjct: 14  FVIYLALGALLC-LATANGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFT 72

Query: 247 EEAAXNNLXFIGAKDSNSKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVF 423
            E +   L +I  KD++ K +       VKG     F       P  A A    +VETV 
Sbjct: 73  SEPS---LAYIDVKDASDKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVA 123

Query: 424 TKALQPYPTAITXQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTXVKPFSQVD 603
           +K ++P+P  I   + QFVKY GNL+ YS Y T++QKT+V L++  + S T VKPFS   
Sbjct: 124 SKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSS 183

Query: 604 GTIIYGPYANVGPFTEK 654
             I  GPY NV  F+++
Sbjct: 184 NKITLGPYENVEAFSQE 200


>BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p
           protein.
          Length = 371

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = +1

Query: 385 AGATVNVVVETVFTKALQPYPTAITXQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTV 564
           A A    +VETV +K ++P+P  I   + QFVKY GNL+ YS Y T++QKT+V L++  +
Sbjct: 24  AAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNI 83

Query: 565 ESFTXVKPFSQVDGTIIYGPYANVGPFTEK 654
            S T VKPFS     I  GPY NV  F+++
Sbjct: 84  LSHTQVKPFSVSSNKITLGPYENVEAFSQE 113


>X51968-1|CAA36226.1|  471|Drosophila melanogaster protein (
           Drosophila melanogasterDNA for type I retrotransposable
           element  R1Dm.  ).
          Length = 471

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 360 CGAQGTPKRRCHSKCCCRNCVHQ 428
           CG QG    +C +   CRNC H+
Sbjct: 422 CGQQGHTAAKCQNPVDCRNCRHR 444


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,331,235
Number of Sequences: 53049
Number of extensions: 545579
Number of successful extensions: 1304
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)