Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B09
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 297 2e-79
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 251 1e-65
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 250 3e-65
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 225 7e-58
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 178 8e-44
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 151 1e-35
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 149 4e-35
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 142 9e-33
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 139 6e-32
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 139 6e-32
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 136 6e-31
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 127 3e-28
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 126 3e-28
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 126 5e-28
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 125 1e-27
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 124 2e-27
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 123 4e-27
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 119 5e-26
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 118 9e-26
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 113 3e-24
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 105 7e-22
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 82 1e-14
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 59 1e-07
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 58 2e-07
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 57 4e-07
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 56 1e-06
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 55 2e-06
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 52 2e-05
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 50 4e-05
UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22; Bacteri... 50 6e-05
UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77; Bacteri... 49 8e-05
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 48 1e-04
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 48 2e-04
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 48 3e-04
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 47 3e-04
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 46 0.001
UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidat... 45 0.002
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 44 0.003
UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1; Neoricke... 44 0.003
UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n... 42 0.010
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 42 0.013
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 42 0.013
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 42 0.017
UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporid... 42 0.017
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 41 0.030
UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6; Bacteria... 41 0.030
UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12; Bacteri... 40 0.052
UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae ... 38 0.16
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 35 1.5
UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG122... 35 2.0
UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8... 34 2.6
UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1; Thraustochyt... 33 6.0
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 33 6.0
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 297 bits (728), Expect = 2e-79
Identities = 136/161 (84%), Positives = 149/161 (92%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 71
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 467
CTVRGAKAE IL +GLKVR YELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 72 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 131
Query: 468 VVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 590
VVLGRPGF++ ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 132 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 172
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 251 bits (615), Expect = 1e-65
Identities = 120/160 (75%), Positives = 133/160 (83%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEKIAVH
Sbjct: 9 MRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVH 68
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 467
TVRG KAE IL RGLKV+ Y+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G+DFY
Sbjct: 69 VTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFY 128
Query: 468 VVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 587
VV+ RPG V R+R G VG H+ TKED + WF+QKYD
Sbjct: 129 VVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYD 168
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 250 bits (611), Expect = 3e-65
Identities = 119/161 (73%), Positives = 134/161 (83%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA +
Sbjct: 11 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 70
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 467
TVRG KA +L GLKV+ YEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFY
Sbjct: 71 VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 130
Query: 468 VVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 590
VVL RPG+ V RRR +VG HR+TK+DAMKWFQ KY+G
Sbjct: 131 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEG 171
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 225 bits (550), Expect = 7e-58
Identities = 102/129 (79%), Positives = 116/129 (89%)
Frame = +3
Query: 204 TGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEXILXRGLKVRXYELRRDNFSATG 383
+GQ PV SKARYTVRSFGIRRNEKIAVHCTVRGAKAE IL +GLKVR YELR++NFS TG
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTG 157
Query: 384 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAM 563
NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR GF++ ++R+TG +G HR++KE+AM
Sbjct: 158 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIGAKHRISKEEAM 217
Query: 564 KWFQQKYDG 590
+WFQQKY G
Sbjct: 218 RWFQQKYAG 226
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 178 bits (434), Expect = 8e-44
Identities = 87/127 (68%), Positives = 102/127 (80%), Gaps = 2/127 (1%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRRNEKI+V
Sbjct: 39 MRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRNEKISVF 98
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI--YGLD 461
CT+RG +A IL RGL+V+ EL++ NFS +GNFGFGIQEHIDLG+KYDP GI YGL
Sbjct: 99 CTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGLL 158
Query: 462 FYVVLGR 482
VV R
Sbjct: 159 CCVVKTR 165
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 151 bits (366), Expect = 1e-35
Identities = 69/155 (44%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Frame = +3
Query: 123 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 302
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV T+RG
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLRG 97
Query: 303 AKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLG 479
+A L + L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D + +
Sbjct: 98 QRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIE 157
Query: 480 RPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKY 584
RPG+ V RRR K+ HR+TKE++M + +++
Sbjct: 158 RPGYRVARRRRARSKIPRRHRVTKEESMVFLAKEF 192
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 149 bits (362), Expect = 4e-35
Identities = 73/161 (45%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E IAV
Sbjct: 27 MRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENIAVM 86
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+RG KA L R L + ++ + GN FGI+EHI + G+KYDP +GI G+D
Sbjct: 87 VTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDV 146
Query: 465 YVVLGRPGFNVXHRRR-KTGKVGFPHRLTKEDAMKWFQQKY 584
+ + RPG + RRR + G + HR+T+E+ M Q +
Sbjct: 147 AITIQRPGHRIVERRRQRRGHIPRRHRVTREETMVLLNQLF 187
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 142 bits (343), Expect = 9e-33
Identities = 70/157 (44%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E I +
Sbjct: 16 MREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEAIGIK 75
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+RG KA L L V+ L R + G F FGI EHIDL G+ YDP +GI+G+D
Sbjct: 76 VTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGVDYDPDVGIFGMDV 134
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQ 575
V L R G+ V RRRK K+ HR+TKED ++W +
Sbjct: 135 CVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 139 bits (336), Expect = 6e-32
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+R +A L R L + LR ++F+A GN FGI+EHI + G +YDP++GI+G D
Sbjct: 92 VTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDV 150
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQ 575
V L RPGF V +RRR VG HR+++E+ +++FQ
Sbjct: 151 AVTLARPGFRVQYRRRARADVGKDHRVSREETIRFFQ 187
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 139 bits (336), Expect = 6e-32
Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 288 CTVRGAKAEXILXRGL-KVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLD 461
T+RG KA IL L ++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+
Sbjct: 65 VTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLE 123
Query: 462 FYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQK 581
YV L RPG+ V RR K KVG HRL KE+ +KW Q++
Sbjct: 124 AYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQEE 163
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 136 bits (328), Expect = 6e-31
Identities = 71/164 (43%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I +
Sbjct: 12 MKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLK 71
Query: 288 CTVRGAKAEXILXR---GLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 455
T+RG KAE L K L +F GNF FG+ EHID G KYDPS+GIYG
Sbjct: 72 VTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYG 131
Query: 456 LDFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 587
+D V + G+ V R+ K + H +TK++A+++ Q K+D
Sbjct: 132 MDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFD 175
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 127 bits (306), Expect = 3e-28
Identities = 62/161 (38%), Positives = 100/161 (62%), Gaps = 1/161 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 4 MNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIACK 63
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+RG KA+ + L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G++
Sbjct: 64 LTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGMNV 123
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 587
V +PG+ + RR + KV HR++KE+ MK+ + ++
Sbjct: 124 SVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFN 164
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 126 bits (305), Expect = 3e-28
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 1/160 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 5 MRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIGCK 64
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+RG +A+ L ++ L R F + GN FGI+EH D G++YDP+IG++G+D
Sbjct: 65 VTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGMDV 124
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKY 584
VVL RPG + RR T K+ HR+T +DA+ + + Y
Sbjct: 125 TVVLKRPGERICKRRIATRKIPTDHRVTVDDAIAFLNESY 164
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 126 bits (304), Expect = 5e-28
Identities = 61/160 (38%), Positives = 99/160 (61%), Gaps = 1/160 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E I V
Sbjct: 9 MKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEPIGVA 68
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+RG A+ +L R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI GL
Sbjct: 69 VTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGI 128
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKY 584
V L RPG+ + R + VG H +T ++A + +++
Sbjct: 129 SVTLTRPGYGIRTRSKHKASVGKSHIITSQEAKDYLVKEF 168
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 125 bits (301), Expect = 1e-27
Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 5 MRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCK 64
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+RG +A+ L L + L R F + GN FGI+EH D G+KYDP+IG++G+D
Sbjct: 65 VTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGMDV 124
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKY 584
VV+ RPG + RR T K+ HR+T ED++ + Y
Sbjct: 125 TVVIKRPGERICKRRIATRKIPTNHRVTLEDSIAFLNDSY 164
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 124 bits (299), Expect = 2e-27
Identities = 68/156 (43%), Positives = 89/156 (57%), Gaps = 2/156 (1%)
Frame = +3
Query: 123 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 302
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I T+R
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 303 A-KAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVL 476
A K + L VR L NF +GN FGI ++ D KYDP IGIYG+D VVL
Sbjct: 66 ADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVL 125
Query: 477 GRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKY 584
RPG V RRR+ KVG HR+ K+++ WF+ ++
Sbjct: 126 ERPGHRVSRRRRRGVKVGVEHRVGKDESKAWFKDQF 161
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 123 bits (296), Expect = 4e-27
Identities = 60/160 (37%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD
Sbjct: 65 VTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDV 124
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKY 584
+ L RPG+ + R + +VG HR+T +A + +++
Sbjct: 125 CMTLSRPGYGIRKRSKHKARVGRSHRITATEAKDFVVREF 164
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 119 bits (287), Expect = 5e-26
Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 2/162 (1%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+ I V
Sbjct: 9 MREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKGLNIGVK 68
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+R A L + Y++ +F GN FGI ++ D G+KYDP IGI+G+D
Sbjct: 69 VTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDI 128
Query: 465 YVVL-GRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 587
+V R G+ + RR K + R++KE+ +K+ Q+ ++
Sbjct: 129 AIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFN 170
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 118 bits (285), Expect = 9e-26
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 464
T+R AE L L + EL F TGNF FG++EH + +YDPSIGIYGLD
Sbjct: 74 VTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDV 131
Query: 465 YVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 587
V L RPG+ V R + + + HRL DA+ + + YD
Sbjct: 132 TVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYD 172
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 113 bits (273), Expect = 3e-24
Identities = 58/168 (34%), Positives = 97/168 (57%)
Frame = -2
Query: 611 CFAIKYDTIIFLLEPLHSIFLCEAVGKSHFSCLTPSVXYVETWPAKYDVKVQSINSN*GI 432
C ++ +I+ LLEP +FL V + F + S TW +V++ ++N++ +
Sbjct: 3 CLFVQNFSIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWV 62
Query: 431 VLDTQVNVFLNTEAKITRGGEVVTPQFIXSDFQTPXKDXFCFSSSDCTMDSNLFITTDTK 252
VLDTQ++VFL+TE ++T EV Q + D QT +D F +++ +DSNLF+++DT+
Sbjct: 63 VLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFSLWTTNSNVDSNLFVSSDTE 122
Query: 251 RPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 108
+ SLG L+ +L Q+LG + Q VT FTN +Q + D++ H
Sbjct: 123 SSDSVSSLGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQFLDLQFTH 170
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 105 bits (253), Expect = 7e-22
Identities = 48/139 (34%), Positives = 84/139 (60%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
M+ + + KL L+I VG SG L +++K+L++++ Q P F A+ T+++F IRR E I+
Sbjct: 1 MKQIFLNKLILSIDVGSSGSNLYKSSKLLKKISLQFPSFGMAKRTIKTFSIRRGEYISCF 60
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 467
C++ K L + LK++ + + NFS T FG GI +H++LG +D IGI+G++
Sbjct: 61 CSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINII 120
Query: 468 VVLGRPGFNVXHRRRKTGK 524
L R G+ + ++ + K
Sbjct: 121 GDLSRRGYRIKLKKEQDPK 139
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 81.8 bits (193), Expect = 1e-14
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = -2
Query: 602 IKYDTIIFLLEPLHSIFLCEAVGKSHFSCL-TPSVXYVETWPAKYDVKVQSINSN*GIVL 426
++ D + LLEP H I L + V + L TP+V V ++DV++ +++ +VL
Sbjct: 35 VQDDALERLLEPSHRISLGKLVLLTDLLLLLTPAVDSVAR-ALQHDVEIHTVDPCGRVVL 93
Query: 425 DTQVNVFLNTEAKITRGGEVVTPQFIXSDFQTPXKDXF-CFSSSDCTMDSNLFITTDTKR 249
D +VNVF +TE ++TRG EV +F + ++ ++ + +LF+T + +R
Sbjct: 94 DAEVNVFADTETEVTRGAEVALEEFEFLHLEPALQNLHRLVPVTNGDVRGDLFVTANAER 153
Query: 248 PHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 108
H + LG+ RLL+ +LLQHL + +T N V+ +L + PH
Sbjct: 154 AHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPH 200
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 58.8 bits (136), Expect = 1e-07
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Frame = +3
Query: 129 KLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 299
K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F IR+ I + T+R
Sbjct: 37 KIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFKIRKGMPIGLKVTLR 96
Query: 300 GAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 458
GA+ L + + KVR + L ++F GN+ FG+ E + + D I G+
Sbjct: 97 GARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSEQLVFPELNPDEVRRIQGM 156
Query: 459 DFYVV 473
D +V
Sbjct: 157 DITIV 161
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 57.6 bits (133), Expect = 2e-07
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Frame = +3
Query: 123 IRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
+ K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR I V T
Sbjct: 31 VTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGWPIGVKVT 90
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 452
+R + L R L +VR + L +F GN+ G++E I I YD +
Sbjct: 91 LRSDRMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDYDKIDALR 150
Query: 453 GLD 461
GLD
Sbjct: 151 GLD 153
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 56.8 bits (131), Expect = 4e-07
Identities = 38/136 (27%), Positives = 66/136 (48%)
Frame = -2
Query: 515 LTPSVXYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIXSDF 336
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE QF D
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDA 122
Query: 335 QTPXKDXFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGF 156
+ D +++ + +L D + LG+ RLL ELL+ L Q V
Sbjct: 123 EAALDDLAGLFAANGDVCGDLLTAADPEAADGEARLGERRLLVGELLEDLSSLCQRVALS 182
Query: 155 TNTYVQAKLSDMKIPH 108
++ V+ +L + PH
Sbjct: 183 SDADVEDELLNADTPH 198
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 55.6 bits (128), Expect = 1e-06
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Frame = +3
Query: 123 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
+ K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R + I H T
Sbjct: 40 LEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREGQPIGCHVT 99
Query: 294 VRGAK----AEXILXRGL-KVRXYE-LRRDNFSATGNFGFGIQEHI-DLGIKYDPSIGIY 452
+RG + A+ +L L ++R + L + F GN+ FG+ E + L I D + I
Sbjct: 100 LRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEIDQDKIVRIR 159
Query: 453 GLDFYVV 473
G+D V
Sbjct: 160 GMDITFV 166
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 54.8 bits (126), Expect = 2e-06
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Frame = +3
Query: 123 IRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+ ++I T
Sbjct: 31 INKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQGQEIGCKVT 90
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 452
+R + R + ++R + L +F GN+ GI+E I I YD GI
Sbjct: 91 LRRKRMWEFFERLISIAIPRIRDFRGLSIKSFDGYGNYTMGIREQIIFPEINYDTIDGIR 150
Query: 453 GLDFYV 470
G++ +
Sbjct: 151 GMNITI 156
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 51.6 bits (118), Expect = 2e-05
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Frame = +3
Query: 123 IRKLCLNICVGESGD--RLTRAAKV-LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
+ K+ +N+ +G G ++ ++ + L ++TGQ+P +K + +V +F R+ + T
Sbjct: 32 VEKVVINMGLGLDGADAKIMKSTEEDLGKITGQKPTVTKFKKSVANFKTRKGTNAGLKVT 91
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 452
+RG K L R + +++ + L F GN+ FGI+EHI + +D I
Sbjct: 92 LRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVNFDRIDKIR 151
Query: 453 GLDFYVVLGRPGFNVXHRRRKTGKVGFP 536
GLD VV+ N H K+ FP
Sbjct: 152 GLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Frame = +3
Query: 123 IRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTV 296
+ K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R + V T+
Sbjct: 31 LEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGMPVGVMVTL 90
Query: 297 RGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQE 407
RG++ L R + +VR + + + F GN+ GI +
Sbjct: 91 RGSRMYEFLDRFVHNALPRVRDFRGIPKTGFDGVGNYNLGISD 133
>UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22;
Bacteria|Rep: 50S ribosomal protein L5 - Onion yellows
phytoplasma
Length = 181
Score = 49.6 bits (113), Expect = 6e-05
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Frame = +3
Query: 123 IRKLCLNICVGESGDRLTRAAKVLEQL---TGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
+ K+ +N+ VG++ + V+E+L +GQ PV +KA+ + +F +R I T
Sbjct: 33 VEKVVINMGVGDAIFNVKVLDDVVEELKLLSGQSPVITKAKKAISNFKLREGMPIGAKVT 92
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 452
+RGA+ E L + +VR + + +F GN+ G++E I I D I
Sbjct: 93 LRGARKEAFLCKLTRLVFPRVRDFRGISGKSFDGRGNYALGLKEQIVFPEINIDKVKKIR 152
Query: 453 GLDFYVV 473
G+D +V
Sbjct: 153 GMDIIIV 159
>UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77;
Bacteria|Rep: 50S ribosomal protein L5 - Desulfotalea
psychrophila
Length = 179
Score = 49.2 bits (112), Expect = 8e-05
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Frame = +3
Query: 123 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
I K+ LN+ +GE+ + AA+ L ++ GQ+ V +KA+ ++ +F +R I T
Sbjct: 31 IEKIVLNMGLGEAVQNPKIVEGAAEELTKIAGQRAVVTKAKKSIATFKLREGMPIGCRVT 90
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 452
+RG K L + + +VR + + F GN+ GIQE I I YD I
Sbjct: 91 LRGEKMYDFLSKLVNIALPRVRDFRGVSPKGFDGRGNYSMGIQEQIIFPEIDYDKIDKIK 150
Query: 453 GLDFYVV 473
G + +V
Sbjct: 151 GFNITIV 157
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 48.4 bits (110), Expect = 1e-04
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Frame = +3
Query: 120 HIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHC 290
+++K+ +N GE+ L K L + Q+P+ ++AR + F IR+ + V
Sbjct: 31 YLKKIVINCGFGEASQNSKFLEGTIKDLSIIASQKPIVTRARKAIAGFQIRKKMPVGVCV 90
Query: 291 TVRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGI 449
T+RG L R + +++ ++ L +F GNF FGI+E + I YD I
Sbjct: 91 TLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIREQLIFPEIHYDKIDKI 150
Query: 450 YGLDFYVV 473
G++ ++
Sbjct: 151 RGMNISII 158
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 48.0 bits (109), Expect = 2e-04
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Frame = +3
Query: 111 RNLH----IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 269
+N+H + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 270 EKIAVHCTVRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIK 428
+ V T+R + L R + ++R + + ++F GN+ GI+E + I
Sbjct: 84 MPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEID 143
Query: 429 YDPSIGIYGLDFYVV 473
YD I G+D ++
Sbjct: 144 YDTIDQIRGMDVSII 158
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 47.6 bits (108), Expect = 3e-04
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Frame = +3
Query: 129 KLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 299
K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N I + T+R
Sbjct: 34 KITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIRENIAIGLVVTLR 93
Query: 300 GAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 458
K L + + ++R + + F GN+ G++E I IKYD I GL
Sbjct: 94 RDKMYDFLNKLINLALPRIRDFRGISYKTFDGRGNYNLGLKEQIIFPEIKYDNVDKIRGL 153
Query: 459 DFYVV 473
D +V
Sbjct: 154 DITIV 158
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Frame = +3
Query: 123 IRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
I+K+ + +CVG++ + K + +TGQ+P KA+ ++ +F +R+ IA T
Sbjct: 36 IKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGLIKAKKSIAAFKLRKGMPIACKVT 95
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQE 407
+R +AE + R + +++ ++ +F GNF FGI++
Sbjct: 96 LRKKRAEDFIRRLVFEVFPRIKDFKGFSIKSFDREGNFSFGIKD 139
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/123 (23%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Frame = +3
Query: 123 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++ + + T
Sbjct: 86 VQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAVT 145
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEH-IDLGIKYDPSIGIY 452
+RG L R + + R ++ + +F GN+ G+++ + I++D
Sbjct: 146 LRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTR 205
Query: 453 GLD 461
G+D
Sbjct: 206 GMD 208
>UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L5 - candidate division TM7 genomosp. GTL1
Length = 194
Score = 44.8 bits (101), Expect = 0.002
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +3
Query: 183 AKVLEQLTGQQPVFSKARYTVRSFGIRRN-EKIAVHCTVRGAKAEXILXRGLKVRXYELR 359
+ L ++TGQQPV AR ++ SF IR +I V T+RGA+ L R + + +R
Sbjct: 64 SNTLRKITGQQPVDRMARKSIASFKIRSGMNRIGVSVTLRGARMYEFLDRLVNIALPRVR 123
Query: 360 RDNFSATGNFGFGIQEHIDLGIKYDPSI 443
+F G GF + LGI D SI
Sbjct: 124 --DFHGVGAKGFDHSGNYSLGIT-DQSI 148
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 44.0 bits (99), Expect = 0.003
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Frame = +3
Query: 123 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 302
I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ IA T++
Sbjct: 29 IKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYIACKVTLQK 87
Query: 303 AKAEXILXRGLKVRXYELRR------DNFSATGNFGFGIQE---HIDLGIKYDPSIGIYG 455
+ + + + ++R DN + N+ I+ ++ ++D IYG
Sbjct: 88 KNMYNFINKLINIVLPKIREFKGFSVDNIDSQNNYTLSIKNMSIFPEIEYQFDIFNKIYG 147
Query: 456 LDFYVV 473
+D +V
Sbjct: 148 MDITIV 153
>UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L5 - Neorickettsia sennetsu (strain Miyayama)
Length = 177
Score = 44.0 bits (99), Expect = 0.003
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Frame = +3
Query: 129 KLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 299
K+CL++ +G S D L A + L + GQ+ V + A+ ++ SF +R+ + T+R
Sbjct: 31 KVCLSVGLGGASSDSKLLASAVEDLSLIAGQKAVVTVAKKSISSFKLRKGFPVGCRVTLR 90
Query: 300 GAKAEXILXRGLKVRXYELR------RDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 458
+ + R L + + + NF GN FG+ EHI + +D + I G+
Sbjct: 91 KRRMFDFINRLLYMALPDQKDFKGFTMRNFDGHGNMAFGLTEHIVFPEVDFDKTYRIIGM 150
Query: 459 DFYVV 473
+ VV
Sbjct: 151 NVVVV 155
>UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L5 - Odontella sinensis (Marine centric diatom)
Length = 238
Score = 42.3 bits (95), Expect = 0.010
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +3
Query: 171 LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEXILXRGL----- 335
L ++ +TGQ+P+ ++A+ + F IR N ++ + T+RG+K L + +
Sbjct: 68 LKKSINEFTAITGQKPIITRAKKAIAGFKIRENMELGLTVTLRGSKMYSFLTKLIFFTFA 127
Query: 336 KVRXYE-LRRDNFSATGNFGFGIQEHI 413
++R + L +F GN+ G++E +
Sbjct: 128 QIRDFRGLSVRSFDKAGNYTLGLKEQL 154
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 504 RRRKTGKVGFPHRLTKEDAMKWFQQKYDG 590
RRR + F HR+TK+DAMKWFQ KY+G
Sbjct: 18 RRRCRLVLVFQHRVTKDDAMKWFQVKYEG 46
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 41.9 bits (94), Expect = 0.013
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +3
Query: 201 LTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEXILXRGLKV---RXYELR---R 362
+ GQ+ A+ +V F +R + V T+RG K R + + R + R R
Sbjct: 59 IAGQKASTVIAKKSVAGFKVREGMPVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPR 118
Query: 363 DNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 473
+ F GN+ FG+QE + + YD + I+G++ VV
Sbjct: 119 NGFDGRGNYNFGLQEQLIFPEVSYDSVMQIHGMNITVV 156
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 41.5 bits (93), Expect = 0.017
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +3
Query: 123 IRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR I T
Sbjct: 31 IEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGYPIGCKVT 90
Query: 294 VRGAK 308
+RG +
Sbjct: 91 LRGER 95
>UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporidium
sp. ex Simulium jonesii|Rep: Ribosomal protein L5 -
Helicosporidium sp. subsp. Simulium jonesii (Green alga)
Length = 181
Score = 41.5 bits (93), Expect = 0.017
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Frame = +3
Query: 201 LTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEXILXRGL-----KVRXYE-LRR 362
+TGQ+P ++A+ + +F I++ + + T+RGAK L + + +R ++ +
Sbjct: 63 MTGQKPKLNRAKKHIAAFKIKKKMILGLSVTLRGAKMYAFLYKFINIILPNIRQFQGIEN 122
Query: 363 DNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVXHRRRKTGKVGFP 536
F + GN F I ++ + Y+P + G F V + NV + +GFP
Sbjct: 123 KQFDSLGNITFPIYSQSNIPELPYNPRVEKRG--FNVTINIKAKNVSEAKALCAYLGFP 179
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 40.7 bits (91), Expect = 0.030
Identities = 31/129 (24%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Frame = +3
Query: 123 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHI---DLGIKYDPSIG 446
+RG L + + K+R ++ + + + G+ GI++ + ++ +YD
Sbjct: 91 LRGNNMYEFLSKLITLVLPKIRDFKGVPFTSINKYGHLAIGIKDLLVFPEIESEYDKFNR 150
Query: 447 IYGLDFYVV 473
+YG + +V
Sbjct: 151 VYGANIVIV 159
>UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6;
Bacteria|Rep: 50S ribosomal protein L5 - Helicobacter
pylori (Campylobacter pylori)
Length = 181
Score = 40.7 bits (91), Expect = 0.030
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Frame = +3
Query: 183 AKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEXILXRGL-----KVRX 347
A+ + + GQ+ V +KA+ +V F IR + T+R + L + + +V+
Sbjct: 54 AQTISLIAGQKAVITKAKKSVAGFKIREGMAVGAKVTLRNKRMYNFLEKLIVISLPRVKD 113
Query: 348 YE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 473
+ + R+ F GN+ FGI E + + YD + +G++ +V
Sbjct: 114 FRGISRNGFDGCGNYTFGINEQLIFPEVVYDDIMVSHGMNITMV 157
>UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12;
Bacteria|Rep: 50S ribosomal protein L5 - Mycoplasma
mobile
Length = 182
Score = 39.9 bits (89), Expect = 0.052
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Frame = +3
Query: 123 IRKLCLNICVGESGDRLTRAAKVLEQLT---GQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
I+K+ +N+ G +V+ +LT GQ P + A+ ++ SF IR + T
Sbjct: 31 IKKIVINMTAGNEVSNTKAVEEVINELTLITGQTPYKTHAKKSLASFKIREGMPMGGKVT 90
Query: 294 VRGAKAEXILXRGL-----KVRXYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 452
+R K L + + ++R + + +F GNF GI+E I I +D
Sbjct: 91 LRRDKMWDFLQKLIDIVIPRIRDFRGISPKSFDGRGNFALGIEEEIIFPEIDFDKIRRNK 150
Query: 453 GLDFYVV 473
GLD +V
Sbjct: 151 GLDVIIV 157
>UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L5 - Opitutaceae
bacterium TAV2
Length = 204
Score = 38.3 bits (85), Expect = 0.16
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +3
Query: 123 IRKLCLNICVGESGDRLTRAAKV---LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
I K+ LN + D+ T+ A + L + GQ+PV +K+R V +F +R+ + + + T
Sbjct: 41 IVKINLNTGIDAEADK-TQIADIQRDLGNIAGQKPVLTKSRKAVSNFKLRQGQIVGAYVT 99
Query: 294 VRGAKAEXILXRGLKVRXYELR-----RDNFSATGNFGFGIQE 407
+RG L R L V +R GN+ GI +
Sbjct: 100 LRGNAMWEFLYRLLAVALPTIRDFRGVPAKLDGRGNYNLGISD 142
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 264 RNEKIAVHCTVRGAKAEXILXRGLKVRXYEL 356
R KIA + TV+G KA +L GLKV+ YEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG12266;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12266 - Caenorhabditis
briggsae
Length = 418
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 454 DWTFTSYLAGQVSTXHTEGVRQEKWDFPTASQRKML 561
DWTFT++ G V+ E ++EKWDF S +K L
Sbjct: 383 DWTFTTHYKGTVNGLKVE--KREKWDFRKNSAKKSL 416
>UniRef50_Q4QE06 Cluster: GPI-anchor transamidase subunit 8 (GPI8),
putative; n=8; Trypanosomatidae|Rep: GPI-anchor
transamidase subunit 8 (GPI8), putative - Leishmania
major
Length = 357
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 599 KYDTIIFLLEPLHSIFLCEAVGKSHFSCLTPSVXYVETWPAKYD 468
+Y ++F+ + H+I LCE V + CL S E++ +YD
Sbjct: 213 RYGRVVFMADTCHAIALCEHVEAPNVVCLAASDAESESYSCQYD 256
>UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L5 -
Thraustochytrium aureum
Length = 190
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 189 VLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAK 308
++E +TGQ+P S ++ +F IR+ + + ++ T+RG +
Sbjct: 59 IIELITGQKPKISFSKKDNSNFNIRKGDLVGIYVTLRGPR 98
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/69 (23%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +3
Query: 180 AAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEXILXRGLKVRXYELR 359
A LE +TGQ+P ++ A+ ++ +F +R+N+ + ++RG L + + + ++
Sbjct: 90 AFTALEMITGQKPKYTCAKKSISTFKLRQNQILGCKNSLRGNTMYRFLEKYISIVSTRIK 149
Query: 360 --RDNFSAT 380
+N+S++
Sbjct: 150 DWSENYSSS 158
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,705,073
Number of Sequences: 1657284
Number of extensions: 12070913
Number of successful extensions: 28687
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 27811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28656
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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