Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B09
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048... 248 2e-66
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576... 248 2e-66
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656... 187 8e-48
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767... 165 2e-41
02_02_0196 + 7685933-7685961,7686086-7686284 86 2e-17
03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962 44 1e-04
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457... 29 3.2
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 28 5.6
03_04_0079 + 17102623-17102644,17102794-17102897,17104461-171046... 28 7.4
01_06_0957 - 33352904-33353212,33353316-33353465,33353544-333536... 28 7.4
>06_03_0409 -
20503480-20503678,20504522-20504717,20504805-20504847,
20505632-20505739,20505848-20505850
Length = 182
Score = 248 bits (608), Expect = 2e-66
Identities = 119/161 (73%), Positives = 132/161 (81%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA +
Sbjct: 11 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 70
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 467
TVRG KA +L GLKV+ YEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFY
Sbjct: 71 VTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 130
Query: 468 VVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 590
VVL R G+ V RRR +VG HR+TKEDAMKWFQ KY+G
Sbjct: 131 VVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 171
>01_01_0745 +
5769150-5769152,5769268-5769375,5769812-5769854,
5769945-5770140,5770836-5771034
Length = 182
Score = 248 bits (608), Expect = 2e-66
Identities = 119/161 (73%), Positives = 132/161 (81%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA +
Sbjct: 11 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 70
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 467
TVRG KA +L GLKV+ YEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFY
Sbjct: 71 VTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 130
Query: 468 VVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 590
VVL R G+ V RRR +VG HR+TKEDAMKWFQ KY+G
Sbjct: 131 VVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 171
>05_02_0095 +
6564703-6564705,6564848-6564955,6565153-6565195,
6565303-6565409,6566310-6566395,6566396-6566594
Length = 181
Score = 187 bits (455), Expect = 8e-48
Identities = 99/163 (60%), Positives = 115/163 (70%), Gaps = 2/163 (1%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA +
Sbjct: 11 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 70
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNF--SATGNFGFGIQEHIDLGIKYDPSIGIYGLD 461
TVRG KA +L GLK+ DN S T + + +YDPS GIYG+D
Sbjct: 71 VTVRGEKAMQLLESGLKIIRIV---DNLIPSVTRSTRAKRINLSNQCFRYDPSTGIYGMD 127
Query: 462 FYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 590
FYVVL R G+ V RRR +VG HR+TKEDAMKWFQ KY+G
Sbjct: 128 FYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 170
>02_02_0195 +
7676014-7676094,7676111-7676218,7676307-7676349,
7676449-7676648
Length = 143
Score = 165 bits (402), Expect = 2e-41
Identities = 82/107 (76%), Positives = 90/107 (84%)
Frame = +3
Query: 108 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 287
MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA +
Sbjct: 37 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 96
Query: 288 CTVRGAKAEXILXRGLKVRXYELRRDNFSATGNFGFGIQEHIDLGIK 428
TVRG KA +L GLKV+ YEL R NFS TG FGFGIQEHIDLGIK
Sbjct: 97 VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 143
>02_02_0196 + 7685933-7685961,7686086-7686284
Length = 75
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +3
Query: 429 YDPSIGIYGLDFYVVLGRPGFNVXHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 590
YDPS GIYG+DFYVVL R G+ V RRR +VG HR+TKEDAMKWFQ KY+G
Sbjct: 11 YDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 64
>03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962
Length = 279
Score = 44.0 bits (99), Expect = 1e-04
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Frame = +3
Query: 123 IRKLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 293
+ K+ +N +G E+G+ L A K L +TGQ PV +KA+ +V SF IR I + T
Sbjct: 105 VEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAVT 164
Query: 294 VRGAKAEXILXR----GL--KVRXYELRRDNFSATGNFGFGIQEH-IDLGIKYDPSIGIY 452
+RG L R GL + + ++F GNF G+++ + I Y+
Sbjct: 165 LRGRVMFNFLDRLINLGLPRTMDFLGVNPNSFDGHGNFTIGLRDQGVFPEIPYEVGGKKN 224
Query: 453 GLDFYVV 473
G+D +V
Sbjct: 225 GMDVCIV 231
>11_04_0418 -
17443989-17444082,17445153-17445406,17445709-17445783,
17446156-17446377,17446789-17446941,17447031-17447167,
17447615-17447933
Length = 417
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 270 EKIAVHCTVRGAKAEXILXRGLK 338
EKIA + TVRG KA +L GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 270 EKIAVHCTVRGAKAEXILXRGLK 338
EKIA + TVRG KA +L GLK
Sbjct: 403 EKIACYVTVRGEKAMQLLEIGLK 425
>03_04_0079 +
17102623-17102644,17102794-17102897,17104461-17104660,
17104864-17105005,17105024-17105290
Length = 244
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 198 APTPWRHESACHRIHQHICSS 136
APTP+ ++ A H + H+C++
Sbjct: 63 APTPYENDKALHFLRHHLCAT 83
>01_06_0957 -
33352904-33353212,33353316-33353465,33353544-33353684,
33354116-33354709
Length = 397
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 448 FMDWTFTSYLAGQVS--TXHTEGVRQEKWDFPTASQRKML*SGSN 576
F +W T+ A ++ T T G ++W TA+ R+ML GS+
Sbjct: 106 FPEWLITALFAVFLASATFKTYGTGMKRWRAETAAARRMLEGGSS 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,836,350
Number of Sequences: 37544
Number of extensions: 332893
Number of successful extensions: 826
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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