Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B06
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0255 - 1900508-1900549,1900728-1900817,1900902-1900995,190... 75 5e-14
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 55 6e-08
02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 40 0.002
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 32 0.46
01_03_0062 - 12140514-12141851 29 2.5
01_03_0060 - 12112595-12113974,12115970-12116077 29 2.5
08_02_0496 - 17807720-17808078,17808503-17809139 28 5.7
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 5.7
02_03_0030 - 14083117-14083166,14083620-14083689,14083777-140838... 28 5.7
08_02_0041 + 11531010-11531366,11531409-11531657 27 9.9
05_04_0086 - 17797792-17797810,17798049-17798234,17798319-177984... 27 9.9
04_04_1570 - 34492944-34493159,34493668-34493842,34493964-344940... 27 9.9
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 27 9.9
01_01_0779 - 6030245-6031780 27 9.9
>06_01_0255 -
1900508-1900549,1900728-1900817,1900902-1900995,
1901119-1901315,1901838-1901957,1902559-1902654,
1902744-1902869,1903125-1903221,1904476-1904546,
1904629-1904724,1904803-1904955,1904993-1905136
Length = 441
Score = 74.9 bits (176), Expect = 5e-14
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Frame = +1
Query: 280 LLHELTLQAMAYDLLPIENDVYKYDASQG----QLKEVLLDENDDLWVELRHQHIAVVST 447
++HE T AM +DLL ++ Y Y+ S+ + KE LL+++D LWVELRH HIA S
Sbjct: 75 VIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPERKEALLEDHDPLWVELRHIHIADASE 134
Query: 448 AVTKNLXKFTESKRMG-----GGDKQSMRDLSQMIKKMPQYQKELSKYATHLRLA 597
+ + F + G + S +DL ++++ +PQY +++ K H+ +A
Sbjct: 135 RLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKIVQALPQYGEQVEKLTLHIEIA 189
>04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,
9992466-9992555,9992692-9992782,9993530-9993729,
9998024-9998101,9998196-9998312,10000017-10000112,
10000192-10000317,10000533-10000629,10000979-10001023,
10002106-10002179,10002267-10002350,10002439-10002522,
10002660-10002851,10003775-10003903,10004061-10004093,
10004190-10004286,10004833-10004883,10005211-10005289,
10005480-10005552,10005595-10005691,10006392-10006473,
10008345-10008691,10010271-10010535,10010624-10010743,
10010971-10011358
Length = 1219
Score = 54.8 bits (126), Expect = 6e-08
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Frame = +1
Query: 280 LLHELTLQAMAYDLLPIENDVY-----KYDASQGQLKEVLLDENDDLWVELRHQHIAV-- 438
++HE T AM +DLL ++ + Y S + KEVLL+++D +W+ELRH +
Sbjct: 655 IIHEWTYDAMCHDLLCMDGNKYVQQVPSKSGSGTENKEVLLEDHDPIWLELRHASERLHE 714
Query: 439 -VSTAVTKNLXKFTESKR-------------MGGGDKQSMRDLSQMIKKMPQYQKELSKY 576
++ V+KN R G G S ++L +M++ +PQY ++ K
Sbjct: 715 KMTNFVSKNKAAQLHQARNIYSGQQMITKVNSGNGGDLSTKELQKMVQALPQYSDQIDKL 774
Query: 577 ATHLRLA 597
A H+ +A
Sbjct: 775 ALHVEIA 781
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Frame = +3
Query: 48 NANMERIAEQIATLCATLGEYPSVRYR----SDWERNVELAQLIQQKLDA-----YKADE 200
N+ + +A +IAT+ A++ E+P V YR D L L KL A +
Sbjct: 569 NSCLNMMATRIATVFASMREFPRVHYRVARTIDASTLTTLRDLAPTKLAAGVWNCLARFK 628
Query: 201 PTMGEGPEKARSQLLVLDRGFDCVSP 278
+ E P+ +LL++DR D ++P
Sbjct: 629 AMIPEFPQTETCELLIVDRSIDQIAP 654
>02_03_0084 -
15041261-15041437,15041625-15041765,15042857-15042946,
15043111-15043201,15043953-15044155,15045361-15045438,
15045535-15045651,15046111-15046161,15046405-15046500,
15046726-15046742,15046938-15047064,15050585-15050681,
15051565-15051638,15051910-15051993,15052099-15052290,
15054191-15054319,15055607-15055639,15055747-15055843,
15055940-15055990,15057494-15057564,15058305-15058455,
15058625-15058703,15059265-15059346,15060335-15060335,
15060565-15060620,15060969-15061018,15061511-15061580
Length = 834
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/103 (30%), Positives = 52/103 (50%)
Frame = +1
Query: 280 LLHELTLQAMAYDLLPIENDVYKYDASQGQLKEVLLDENDDLWVELRHQHIAVVSTAVTK 459
++HE T AM +DLL ++ + Y ++AS E L D+ +S V+K
Sbjct: 358 IIHEWTYDAMCHDLLCMDGNKYVHEAS-----ERLHDK---------------MSNFVSK 397
Query: 460 NLXKFTESKRMGGGDKQSMRDLSQMIKKMPQYQKELSKYATHL 588
N + R GG + S RDL +M++ +PQY ++ K + H+
Sbjct: 398 NKAAQLQQARTGG--EISNRDLQKMVQALPQYSDQIEKLSLHV 438
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +3
Query: 48 NANMERIAEQIATLCATLGEYPSVRYR----SDWERNVELAQLIQQKLDA-----YKADE 200
NA + +A +I+T+ A++ E+P V YR D L L+ KL A +
Sbjct: 272 NACLNTMATRISTVFASMREFPRVHYRVAKTIDASVTTTLRDLVPTKLAAAVWNCLSKLK 331
Query: 201 PTMGEGPEKARSQLLVLDRGFDCVSP 278
++ + P+ +LL++DR D ++P
Sbjct: 332 TSIPDYPQTETCELLIVDRSVDQIAP 357
>01_02_0042 -
10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/82 (29%), Positives = 34/82 (41%)
Frame = +3
Query: 6 DPKILCLLALAQTRNANMERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDA 185
DP+IL L +A ERI ++ T V +R RN + +I Q
Sbjct: 550 DPRILLLDEATSALDAESERIVQEALDRVMTNRTTVIVAHRLSTVRNADTIAVIHQGTLV 609
Query: 186 YKADEPTMGEGPEKARSQLLVL 251
K + + PE A SQL+ L
Sbjct: 610 EKGPHHELLKDPEGAYSQLIKL 631
>01_03_0062 - 12140514-12141851
Length = 445
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 397 HFHPRELPLTAPGMHHTCKHHFQLAEDRK 311
H+ PR L + G +H KHH EDRK
Sbjct: 29 HYEPR---LVSVGPYHRSKHHLSAMEDRK 54
>01_03_0060 - 12112595-12113974,12115970-12116077
Length = 495
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 397 HFHPRELPLTAPGMHHTCKHHFQLAEDRK 311
H+ PR L + G +H KHH + EDRK
Sbjct: 87 HYEPR---LVSIGPYHRSKHHLRAMEDRK 112
>08_02_0496 - 17807720-17808078,17808503-17809139
Length = 331
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 376 EVLLDENDDLWVELRHQHIAVV 441
EVL+DENDD WV ++ Q I ++
Sbjct: 12 EVLIDENDD-WVIVKKQRITIL 32
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 229 PVLSFSFWTADSIACLRL--LHELTLQAMAYDLLPIENDVYKYDASQGQLKEVLLDENDD 402
P+ + + TA CL L + + +++ L I++DV + + GQ+K + +D+N
Sbjct: 461 PITTQAIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTS 520
Query: 403 LWVELRHQHIAVVSTA 450
+V LR I +A
Sbjct: 521 GFVYLRFDSITAAMSA 536
>02_03_0030 -
14083117-14083166,14083620-14083689,14083777-14083857,
14083940-14084065,14084916-14085143,14085246-14085325,
14086567-14086768,14086857-14086946
Length = 308
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +1
Query: 280 LLHELTLQAMAYDLLPIEN---DVYKYDASQGQLKEVLLDENDD 402
LL++ T QAM ++L+ IEN D+ +Y KEV+L D
Sbjct: 235 LLNQWTYQAMVHELIGIENNKVDLREYPNVPKDQKEVVLSSVQD 278
>08_02_0041 + 11531010-11531366,11531409-11531657
Length = 201
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 355 ASQGQLKEVLLDENDDLWVELRHQHIAVVSTAVTKNLXKFTESKR-MGGGDKQSMRDLSQ 531
AS G ++ L+D D+LW+ +R + + + V + K + G D +R L+
Sbjct: 47 ASGGVVQPPLVDPEDELWMHIRLMMMPMTDSMVRPMVEVLEHEKEVLTGEDLAPVRTLAV 106
Query: 532 MIKKM 546
++ M
Sbjct: 107 VLSPM 111
>05_04_0086 -
17797792-17797810,17798049-17798234,17798319-17798407,
17798518-17798712,17799364-17799525,17799609-17799681,
17799929-17799996,17800086-17800133,17800223-17800288,
17800418-17800488,17800825-17800891
Length = 347
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 15 ILCLLALAQTRNANMERIAEQIATLCATLGEYPSVRYRSD 134
+ CLL L R + +TL TL EY S Y +D
Sbjct: 12 LCCLLVLCSGRELKTKHTPIYNSTLARTLAEYTSAVYTAD 51
>04_04_1570 -
34492944-34493159,34493668-34493842,34493964-34494068,
34494454-34494623,34494760-34494830,34494950-34496799,
34497003-34497052,34497147-34497263
Length = 917
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +2
Query: 356 HPRGS*RKFSWMKMMTYGSNCGTSILLWSPQQLQRI*XNSPSPNAWVAV 502
HP F +K +T G N T + P+ L+ + P +W V
Sbjct: 743 HPSSRPPLFEKIKQLTSGENLSTCQIFGDPKMLENLKLRDLHPASWFCV 791
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -2
Query: 391 HPRELPLTAPGMHHTCKHHFQLAEDRKPWL--EELVRVVNG-DTQSNPRSRTRS 239
H ++ P HH HH Q + ++ WL ++ R G D S P++ +S
Sbjct: 44 HHQQYVQRQPQQHHHHNHHQQHQQQQQQWLRRNQIAREAAGTDRNSEPKAVAQS 97
>01_01_0779 - 6030245-6031780
Length = 511
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 103 PSVAQRVAICSAIRSMFALRVCARANKQRIFGSG 2
P A R A + R M L CAR ++QR+ G G
Sbjct: 239 PGFAFRRARLAGARLMHTLGDCARQSRQRMLGGG 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,085,028
Number of Sequences: 37544
Number of extensions: 359036
Number of successful extensions: 1002
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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