Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B06
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30587| Best HMM Match : IncA (HMM E-Value=0.42) 70 1e-12
SB_44472| Best HMM Match : Y_phosphatase (HMM E-Value=0) 31 0.62
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 29 2.5
SB_104| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_7618| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.53) 29 3.3
SB_33023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_16904| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 28 5.8
SB_22123| Best HMM Match : Ion_trans_2 (HMM E-Value=1.9e-15) 28 5.8
SB_20629| Best HMM Match : WD40 (HMM E-Value=0.0014) 28 7.7
SB_27500| Best HMM Match : WD40 (HMM E-Value=3.5e-05) 28 7.7
>SB_30587| Best HMM Match : IncA (HMM E-Value=0.42)
Length = 272
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = +3
Query: 54 NMERIAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGE 215
+ME+IAEQ+ATLCA+LGE+PS+RY+ D + V A ++ +LD YK D+P++GE
Sbjct: 26 HMEKIAEQLATLCASLGEFPSIRYKPDNPKMVGFANQVKARLDVYKRDDPSIGE 79
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/67 (44%), Positives = 47/67 (70%)
Frame = +1
Query: 373 KEVLLDENDDLWVELRHQHIAVVSTAVTKNLXKFTESKRMGGGDKQSMRDLSQMIKKMPQ 552
KE LLDEND++WV+LRH HIA VS + + + +F+E +++ + M+DL M+KK PQ
Sbjct: 138 KEALLDENDEMWVKLRHLHIADVSRKIPEEIKEFSEKEKL-PSSQNKMKDLQAMLKKAPQ 196
Query: 553 YQKELSK 573
Y+ ++ K
Sbjct: 197 YKDQVKK 203
>SB_44472| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 206
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 322 LPIENDVYKYDASQGQLKEVLLDENDDLWVELRHQHIAVVSTAVTKNLXKFTESKR 489
+ + D+Y+Y A+QG + L +D W + Q++ VV A + + + +SK+
Sbjct: 1 IKVGRDIYRYIAAQGPMTNTL----NDFWQMIWEQNVHVVVMATEEKVHRVGQSKK 52
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 439 VSTAVTKNLXKFTESKRMGGGDKQSMRDLSQMIKKMPQYQKELSKYATHLRLAEDCMK 612
VST + + +R+G + Q ++D+ +KK+ + ++ + A HL+ ED K
Sbjct: 576 VSTGADAGVFDISNKRRLGLSEVQCVQDMYNGVKKLLEIERAAIEEA-HLKFPEDLKK 632
>SB_104| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.5 bits (63), Expect = 2.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 236 RTGFFWSFAHSWFVGLISIKFLLD 165
R GF+W F+H+W++ + L++
Sbjct: 194 RKGFYWCFSHAWWINVEKAALLIN 217
>SB_7618| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.53)
Length = 319
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 236 RTGFFWSFAHSWFVGLISIKFLL 168
R GF+W F+H+W++ + L+
Sbjct: 195 RKGFYWCFSHAWWINVEKAALLI 217
>SB_33023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 151 STLRSQSLRYRTEGYSPSVAQRVAICSAIRSMFAL 47
ST R+ +L+YR E Y+P + R + +AIR+ A+
Sbjct: 120 STWRTTTLKYRIENYTPDL-PREEVDNAIRNALAM 153
>SB_16904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 541 KMPQYQKELSKYATHLRLAEDCMKSY-QXICXQT 639
K QYQ+EL HLRL ED M+ Q + QT
Sbjct: 753 KAVQYQEELQAIKDHLRLQEDKMRELTQALNKQT 786
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 111 PSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGEGPEK 227
PSV S E + ELA + QK+ +A + M EG EK
Sbjct: 319 PSVEIPSQAEEDAELATIFLQKIIRGRAIQNMMFEGKEK 357
>SB_22123| Best HMM Match : Ion_trans_2 (HMM E-Value=1.9e-15)
Length = 301
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 266 IESAVQNEKLRTGFFWSFAHSWFVGLISI 180
+ES V+ EK+R+ W+FA S F +S+
Sbjct: 63 VESVVEEEKVRSRPDWTFARSVFFVFVSL 91
>SB_20629| Best HMM Match : WD40 (HMM E-Value=0.0014)
Length = 230
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 196 TNQLWAKDQKKPVLSFSFWTADSIACLRLLHE 291
T+ + K+ K PVL FS I C+R+L++
Sbjct: 147 TSDIRLKEPKTPVLCFSHGKGAPITCIRVLND 178
>SB_27500| Best HMM Match : WD40 (HMM E-Value=3.5e-05)
Length = 196
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 196 TNQLWAKDQKKPVLSFSFWTADSIACLRLLHE 291
T+ + K+ K PVL FS I C+R+L++
Sbjct: 49 TSDIRLKEPKTPVLCFSHGKGAPITCIRVLND 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,868,269
Number of Sequences: 59808
Number of extensions: 425050
Number of successful extensions: 1211
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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