Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B06
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.5  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +3

Query: 66  IAEQIATLCATLGEYPSVRYRSDWERNVELAQLIQQKLDAYKADEPTMGE 215
           +A   +T+   +    +VR++++ ERN+ +      KLD  +A++ T GE
Sbjct: 51  VAHGKSTIVKAISGVQTVRFKNELERNITI------KLDT-RAEDSTRGE 93


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +1

Query: 424 QHIAVVSTAVTKNLXKFTESKRMGGGDKQSMRDLSQMIKKMPQYQKELSKYATHL 588
           Q   VVS    + L +  +  ++GGG +Q++  L + +    Q  + +  Y  +L
Sbjct: 667 QQYQVVSVEQYQQLKEQGQISQVGGGIQQNVEVLPENLVNAQQQVQAVRNYYANL 721


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,361
Number of Sequences: 438
Number of extensions: 3474
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)