Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B04
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514 170 7e-43
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294 169 1e-42
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923 167 5e-42
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504... 52 4e-07
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 32 0.35
07_01_0344 - 2490700-2493249 30 1.1
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 30 1.1
03_06_0314 - 33077621-33077869,33078218-33078280,33079392-330794... 30 1.1
02_02_0377 + 9554685-9554915 29 2.4
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 29 3.2
01_07_0378 - 43167805-43169152,43169258-43169326,43169473-431695... 28 4.3
10_08_0853 - 21076085-21076138,21076188-21076333,21076540-210766... 27 7.5
11_01_0551 + 4361640-4363386,4363443-4363687 27 9.9
>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
Length = 130
Score = 170 bits (413), Expect = 7e-43
Identities = 79/121 (65%), Positives = 98/121 (80%)
Frame = +2
Query: 107 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
A + G + +A ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+P
Sbjct: 9 AGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIP 68
Query: 287 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIA 466
TK+L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S ++VKQITSI IEPGV VEVTIA
Sbjct: 69 TKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIA 128
Query: 467 D 469
D
Sbjct: 129 D 129
>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
Length = 127
Score = 169 bits (411), Expect = 1e-42
Identities = 83/126 (65%), Positives = 101/126 (80%), Gaps = 4/126 (3%)
Frame = +2
Query: 104 MAAAVV----SGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKG 271
MAAA V G + +A ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKG
Sbjct: 1 MAAAAVYGGMKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 60
Query: 272 PVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXV 451
PVR+PTK+L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S ++VKQITSI IEPGV V
Sbjct: 61 PVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEV 120
Query: 452 EVTIAD 469
EVTIAD
Sbjct: 121 EVTIAD 126
>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
Length = 128
Score = 167 bits (406), Expect = 5e-42
Identities = 80/121 (66%), Positives = 99/121 (81%)
Frame = +2
Query: 107 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
A + SGK + EV HRIRITL+S++V++LEKVC DL+ GAK + L+VKGPVRMP
Sbjct: 9 APPMKSGKIGFESSQEVQ--HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMP 66
Query: 287 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIA 466
TK+L ITTRK+PCGEG+ TWDRF+MR+HKRVIDL S +++VKQITSI IEPGV VEVTI+
Sbjct: 67 TKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTIS 126
Query: 467 D 469
D
Sbjct: 127 D 127
>03_02_0020 -
5045900-5046211,5046233-5046290,5046604-5047242,
5048475-5048515,5048672-5048728,5048952-5049140
Length = 431
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 155 VSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 334
++P +IRI L S V +E C +I AK + GPV +PTK +P
Sbjct: 329 LAPKQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTKRRVYCVLNSPHVHK 388
Query: 335 SKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVXVEVTI 463
+ F++R H+R+ID+ P ++ + + + + GV VEV +
Sbjct: 389 DSRF-HFEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVEVKL 431
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 31.9 bits (69), Expect = 0.35
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
Y FFFFFFF FFFF
Sbjct: 85 YAFFFFFFFFFFFFFF 100
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 87 FFFFFFFFFFFFFFFF 102
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 88 FFFFFFFFFFFFFFFF 103
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 89 FFFFFFFFFFFFFFFF 104
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 90 FFFFFFFFFFFFFFFF 105
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 91 FFFFFFFFFFFFFFFF 106
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 92 FFFFFFFFFFFFFFFF 107
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 93 FFFFFFFFFFFFFFFF 108
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFFKNILLAALPTRRR 462
+ FFFFFFF FFF ++ RRR
Sbjct: 94 FFFFFFFFFFFFFFFSGDVYCGHRHFRRR 122
>07_01_0344 - 2490700-2493249
Length = 849
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 171 RWIGETSAWGFSMSLPDTTAAA 106
RWIG++S F++SLP T A A
Sbjct: 46 RWIGDSSPKNFTLSLPGTVATA 67
>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 62 FFFFFFFFFFFFFFFF 77
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 63 FFFFFFFFFFFFFFFF 78
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 64 FFFFFFFFFFFFFFFF 79
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 65 FFFFFFFFFFFFFFFF 80
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 66 FFFFFFFFFFFFFFFF 81
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 67 FFFFFFFFFFFFFFFF 82
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 68 FFFFFFFFFFFFFFFF 83
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 69 FFFFFFFFFFFFFFFF 84
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 70 FFFFFFFFFFFFFFFF 85
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFF 501
+ FFFFFFF FFFF
Sbjct: 71 FFFFFFFFFFFFFFFF 86
>03_06_0314 -
33077621-33077869,33078218-33078280,33079392-33079449,
33079534-33079688,33079797-33080106,33080634-33080890,
33081280-33081359,33083888-33083948
Length = 410
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 199 CALAREGLC*PNQWSQETEAACKGPSP 279
C LA EGL ++W++ A +GPSP
Sbjct: 155 CRLAAEGLVTASKWARPGRAGTRGPSP 181
>02_02_0377 + 9554685-9554915
Length = 76
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +2
Query: 476 AEPPIKYF*KKKXXXKKKKKKKK 544
AEP I KKK KKKKKKKK
Sbjct: 16 AEPDINAKKKKKKKKKKKKKKKK 38
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 172 HQDHSYFTQCALAREGLC*PNQWSQETEAACKG--PSPH---ANQDPA 300
H S +CAL R+G +W ET C G P+P +QDPA
Sbjct: 11 HHLQSTLFECALLRDGRAESFEWLFETFKNCMGNCPTPRCILTDQDPA 58
>01_07_0378 -
43167805-43169152,43169258-43169326,43169473-43169544,
43169677-43169745,43169979-43171161,43171239-43171365
Length = 955
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 548 YXFFFFFFFXXXFFFFKNILLAALP 474
+ FFFFFFF F ++ +A +P
Sbjct: 18 FFFFFFFFFAVAVVLFSSVSVAQIP 42
>10_08_0853 -
21076085-21076138,21076188-21076333,21076540-21076645,
21076739-21076816,21076923-21076979,21077070-21077130,
21077360-21077412,21077613-21077699,21077820-21077899,
21079469-21079681,21079824-21080064
Length = 391
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 542 FFFFFFFXXXFFFFKNI 492
FF FFFF FFFF ++
Sbjct: 46 FFLFFFFLLFFFFFFSV 62
>11_01_0551 + 4361640-4363386,4363443-4363687
Length = 663
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 492 NIFEKKKXXXKKKKKKKXV 548
+I EKKK KKKKKKK V
Sbjct: 300 SIKEKKKRAEKKKKKKKKV 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,714,363
Number of Sequences: 37544
Number of extensions: 329854
Number of successful extensions: 1342
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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