Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B04
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   204   6e-53
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   204   6e-53
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   204   6e-53
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   199   2e-51
BT024421-1|ABC86483.1|  585|Drosophila melanogaster IP02833p pro...    29   5.5  
BT029593-1|ABL75652.1|  161|Drosophila melanogaster IP16955p pro...    28   9.6  
BT015301-1|AAT95405.1|  252|Drosophila melanogaster AT18211p pro...    28   9.6  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  204 bits (498), Expect = 6e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 469
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  204 bits (498), Expect = 6e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 469
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  204 bits (498), Expect = 6e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 469
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  199 bits (486), Expect = 2e-51
 Identities = 96/115 (83%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = +2

Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
           KDIEKP   + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 469
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>BT024421-1|ABC86483.1|  585|Drosophila melanogaster IP02833p
           protein.
          Length = 585

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 21/48 (43%), Positives = 24/48 (50%)
 Frame = +2

Query: 401 EIVKQITSINIEPGVXVEVTIADA*AEPPIKYF*KKKXXXKKKKKKKK 544
           E  KQ T+      V   +TI     +PP K   KKK   KKKKKKKK
Sbjct: 539 ESFKQTTNETHVTEVDFPLTIKVT-PKPPKKKKKKKKKKKKKKKKKKK 585


>BT029593-1|ABL75652.1|  161|Drosophila melanogaster IP16955p
           protein.
          Length = 161

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 485 PIKYF*KKKXXXKKKKKKKK 544
           PIK F ++K   KKKKKKKK
Sbjct: 140 PIKGFKEEKKKKKKKKKKKK 159


>BT015301-1|AAT95405.1|  252|Drosophila melanogaster AT18211p
           protein.
          Length = 252

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +2

Query: 479 EPPIK--YF*KKKXXXKKKKKKKK 544
           EP I+  +F KKK   KKKKKKKK
Sbjct: 227 EPEIQSLHFLKKKKKKKKKKKKKK 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,178,982
Number of Sequences: 53049
Number of extensions: 550593
Number of successful extensions: 2232
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1962
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)