Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_B01
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0461 + 22446797-22447050,22447171-22447288,22447895-224482...    94   7e-20
02_01_0087 + 623174-623421,623576-623693,624266-624588,625267-62...    91   7e-19
07_03_0078 - 13147741-13148913                                         28   5.6  
09_03_0214 - 13517895-13518012,13519008-13519052,13519611-135196...    28   7.4  
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361...    27   9.7  
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397...    27   9.7  
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378...    27   9.7  

>01_05_0461 +
           22446797-22447050,22447171-22447288,22447895-22448217,
           22448908-22449056,22449324-22449463,22449606-22449757,
           22449862-22450021,22450071-22450088
          Length = 437

 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 41/75 (54%), Positives = 53/75 (70%)
 Frame = +2

Query: 74  QVVSFILFVRILSVFLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYLFPSVV 253
           +V++  L  R  +  LVRT++ PDE+WQ LEVAH+ VF YG LTWEW+RG+RSYL P + 
Sbjct: 47  RVLALALAFRAANALLVRTYFNPDEHWQCLEVAHRIVFGYGHLTWEWKRGLRSYLHPFIF 106

Query: 254 AVLYSILKVTGLDHP 298
           A LY IL +  LD P
Sbjct: 107 AALYKILSLLHLDSP 121


>02_01_0087 +
           623174-623421,623576-623693,624266-624588,625267-625551,
           625643-625823,625964-626119
          Length = 436

 Score = 91.1 bits (216), Expect = 7e-19
 Identities = 41/75 (54%), Positives = 52/75 (69%)
 Frame = +2

Query: 74  QVVSFILFVRILSVFLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYLFPSVV 253
           +V++  L  R  +  LVRT++ PDE+WQ LEVAH+ VF Y  LTWEW+RG+RSYL P V 
Sbjct: 45  RVLALALAFRAANALLVRTYFNPDEHWQCLEVAHRIVFGYDHLTWEWKRGLRSYLHPLVF 104

Query: 254 AVLYSILKVTGLDHP 298
           A LY IL +  LD P
Sbjct: 105 AALYKILALLHLDTP 119


>07_03_0078 - 13147741-13148913
          Length = 390

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +2

Query: 98  VRILSV--FLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRG 223
           VR+  V   +V  W V   Y   L   H+ + HY    W+W RG
Sbjct: 262 VRVYGVPLLVVNAWLVVVTY---LHHTHRAIPHYDSSEWDWLRG 302


>09_03_0214 -
          13517895-13518012,13519008-13519052,13519611-13519687,
          13520536-13520668,13522210-13522322
          Length = 161

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 86 KRPPERASNPLPTPFSRLSKTCRR 15
          +RPP  A++PLP P SR S+  RR
Sbjct: 22 ERPPA-AADPLPPPMSRRSEVMRR 44


>09_04_0752 +
           19933604-19934278,19934679-19935387,19936118-19936161,
           19936607-19936704,19937056-19937160,19937694-19937757,
           19938316-19938885
          Length = 754

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 174 INKCSTMENSPGNGRGVSGATYS 242
           +N C     SPG G GV  ATYS
Sbjct: 48  LNSCCRAPPSPGGGGGVHVATYS 70


>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
            3973665-3973982,3974565-3974763,3974937-3975202,
            3975288-3975574,3976714-3977818,3977900-3978046,
            3978146-3978226,3978315-3978540,3978622-3978761,
            3979539-3979645,3979739-3979841
          Length = 3638

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 227  RSYLFPSVVAVLYSILKVTGLDHPEAVILLPRILQAI 337
            +S +   +V  L  +LKV  LDHP+A  ++  IL+A+
Sbjct: 1887 KSMIDGGMVQSLSGLLKVIDLDHPDAPKVVNLILKAL 1923


>03_04_0013 +
           16436438-16436536,16437257-16437742,16437791-16437826,
           16437835-16438323,16438951-16439622
          Length = 593

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 437 GRTLLQTTETALVAIALSVFPFXSGKLGYYDKE 535
           G+T+ +  +T LVA     FPF   KL   +KE
Sbjct: 469 GKTVTKDAKTPLVAHGADAFPFTEEKLQELEKE 501


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,832,010
Number of Sequences: 37544
Number of extensions: 425510
Number of successful extensions: 1018
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)