Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B01
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical pr... 135 3e-32
AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alph... 135 3e-32
U41991-3|AAA83343.2| 350|Caenorhabditis elegans Seven tm recept... 30 1.6
Z68760-6|CAE17824.1| 83|Caenorhabditis elegans Hypothetical pr... 29 3.8
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF016450-5|AAB65984.2| 280|Caenorhabditis elegans Serpentine re... 29 3.8
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 28 6.6
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 6.6
>U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical
protein T27F7.3a protein.
Length = 496
Score = 135 bits (326), Expect = 3e-32
Identities = 68/192 (35%), Positives = 112/192 (58%), Gaps = 7/192 (3%)
Frame = +2
Query: 71 VQVVSFILFVRILSVFLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYLFPSV 250
+++++ ++ R +SV+LV +W+VPDE +Q+ EVAH V+ G L+WEW+ +RS+ P++
Sbjct: 5 LRLLAKLVVFRCISVYLVASWFVPDEVYQSAEVAHHLVYGTGHLSWEWRHSLRSFFHPAL 64
Query: 251 VAVLYSILKVTGLDHPEAVILLPRILQAILSTAADYSFY-------KWTGGRKWALFLIL 409
+AV+ L + L + +PR+ A+L AD+SFY K G + + L
Sbjct: 65 IAVIIKFLDILSLSSQPLIYHIPRLAHALLFALADFSFYKICLRLCKTKGIAENSFVTYL 124
Query: 410 TSWFWFYTSGRTLLQTTETALVAIALSVFPFXSGKLGYYDKENTSWIWLAVIAVFLRPTS 589
+SWF FY + RTL + ET+L IAL+ FPF + + +I L V+ + +RPT
Sbjct: 125 SSWFVFYCAPRTLSNSLETSLTLIALNWFPFETKN---FKGPTWPYIALGVLTIIIRPTV 181
Query: 590 APLWAVLTIYNL 625
A +W V +Y+L
Sbjct: 182 ALIWLVFGVYHL 193
>AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alpha 2
mannosyltransferaseprotein.
Length = 496
Score = 135 bits (326), Expect = 3e-32
Identities = 68/192 (35%), Positives = 112/192 (58%), Gaps = 7/192 (3%)
Frame = +2
Query: 71 VQVVSFILFVRILSVFLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYLFPSV 250
+++++ ++ R +SV+LV +W+VPDE +Q+ EVAH V+ G L+WEW+ +RS+ P++
Sbjct: 5 LRLLAKLVVFRCISVYLVASWFVPDEVYQSAEVAHHLVYGTGHLSWEWRHSLRSFFHPAL 64
Query: 251 VAVLYSILKVTGLDHPEAVILLPRILQAILSTAADYSFY-------KWTGGRKWALFLIL 409
+AV+ L + L + +PR+ A+L AD+SFY K G + + L
Sbjct: 65 IAVIIKFLDILSLSSQPLIYHIPRLAHALLFALADFSFYKICLRLCKTKGIAENSFVTYL 124
Query: 410 TSWFWFYTSGRTLLQTTETALVAIALSVFPFXSGKLGYYDKENTSWIWLAVIAVFLRPTS 589
+SWF FY + RTL + ET+L IAL+ FPF + + +I L V+ + +RPT
Sbjct: 125 SSWFVFYCAPRTLSNSLETSLTLIALNWFPFETKN---FKGPTWPYIALGVLTIIIRPTV 181
Query: 590 APLWAVLTIYNL 625
A +W V +Y+L
Sbjct: 182 ALIWLVFGVYHL 193
>U41991-3|AAA83343.2| 350|Caenorhabditis elegans Seven tm receptor
protein 220 protein.
Length = 350
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +2
Query: 215 QRGIRSYL--FPSVVAVLYSILKVT----GLDHPEAVILLPRILQAILST---AADYSFY 367
Q G+ YL F S+ +LYS+L+VT + +V++L + S SFY
Sbjct: 40 QLGVYKYLMVFISIFEILYSLLEVTLTPIHYSYRSSVVVLITTSDKLFSRDILLTLNSFY 99
Query: 368 KWTGGRKWALFLILTSWFWFYTSGRTLLQTTET 466
G A+F I + + SG LLQT ++
Sbjct: 100 WGFFGSSLAIFAIHFVYRYLVISGNALLQTFQS 132
>Z68760-6|CAE17824.1| 83|Caenorhabditis elegans Hypothetical
protein F36H1.11 protein.
Length = 83
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 167 LPRSASTRQEHTKFSLRIQKV 105
LPRSA T+QEH F L K+
Sbjct: 41 LPRSAGTQQEHPFFQLEAMKI 61
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 357 TVSINGQEVGSGLCSSFSHLGSGSILQAEHCSRL 458
T+ +NG VGS C + H+ S Q HCS++
Sbjct: 643 TIPVNGH-VGSRCCPTKQHICSQPPQQGNHCSKI 675
>AF016450-5|AAB65984.2| 280|Caenorhabditis elegans Serpentine
receptor, class t protein68 protein.
Length = 280
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = +2
Query: 62 LRPVQVVSFILFVRILSVFLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYLF 241
L V ++S++++V + +VP + L+ H +F + E+ + SYL
Sbjct: 136 LSVVCILSWVVYVFLYGCITQNFMFVPPGWAYDLDAPHAAIFAHLEIGLSFLSLTISYL- 194
Query: 242 PSVVAVLYSILKVTGLDHPE 301
S +A+ Y I K TG + +
Sbjct: 195 -SYLAIDYIIRKKTGTSNSQ 213
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical protein
F59F3.5 protein.
Length = 1199
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -2
Query: 553 PYP*CVLFIIISKFSTXEWKNR*GDCHKSCLCSLEQCSA*SIEPEP 416
PYP C F ++ T R +CHK ++ C S + P
Sbjct: 1104 PYPDCPNFSLVEYIKTGNINKRPSNCHKDVYKIMKMCWQASPDDRP 1149
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 191 SGTLVYGPLPRSASTRQEHTKFS 123
S T + P P++A T+QEH KF+
Sbjct: 183 SKTTIEIPTPKAAETQQEHVKFA 205
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +3
Query: 174 INKCSTMENSPGNGRGVSGATYSRA*LLSCIVY*RLLAWITLKL*FFYLGSYKQYSVLQQ 353
+NKCST+EN G++G + + VY L Y G Y ++
Sbjct: 1263 LNKCSTLEN------GITGCCCNTNACIDPTVYPARNPGNQLMC---YAGISSNY-IVNG 1312
Query: 354 TTVSINGQEVGSGLCSSFSHLGSGSILQAEHC 449
+ V++ Q +G CSS S + G + HC
Sbjct: 1313 SAVNVGAQIPCNGQCSSLSGVVGGFQVNTYHC 1344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,623,221
Number of Sequences: 27780
Number of extensions: 351333
Number of successful extensions: 952
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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