Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_B01
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14850.2 68418.m01742 mannosyltransferase, putative similar t... 154 6e-38
At5g14850.1 68418.m01741 mannosyltransferase, putative similar t... 154 6e-38
At1g61065.1 68414.m06875 expressed protein 32 0.38
At4g01540.1 68417.m00200 no apical meristem (NAM) family protein... 29 3.5
At5g50140.1 68418.m06210 ankyrin repeat family protein contains ... 28 4.7
At2g27220.1 68415.m03271 homeodomain-containing protein 28 6.1
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 28 6.1
At1g27420.1 68414.m03342 kelch repeat-containing F-box family pr... 28 6.1
At5g13940.1 68418.m01630 hypothetical protein 27 8.1
At1g71680.1 68414.m08271 lysine and histidine specific transport... 27 8.1
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 27 8.1
>At5g14850.2 68418.m01742 mannosyltransferase, putative similar to
PIGB from Homo sapiens [gi:1552169], Mus musculus
[gi:7634741]
Length = 529
Score = 154 bits (373), Expect = 6e-38
Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
Frame = +2
Query: 68 PVQVVSFILFVRILSVFLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYLFPS 247
P ++ F L R+++ L++T++ PDE+WQ+LEVAH+ +F YG +TWEW+RGIRSYL P
Sbjct: 38 PRRIFLFCLAFRVVNALLIQTYFNPDEHWQSLEVAHRTIFGYGYMTWEWKRGIRSYLHPM 97
Query: 248 VVAVLYSILKVTGLDHPEAVILLPRILQAILSTAADYSFYKWT----GGR--KWALFLIL 409
+ A LY +L+VTGLD P +I PR++Q+I S D YK + GG W+LF +
Sbjct: 98 LFAFLYKLLQVTGLDTPYIMIKAPRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQM 157
Query: 410 TSWFWFYTSGRTLLQTTETALVAIALSVFP-FXSGKLGYYDKENTSW-IWLAVIAVFLRP 583
+WF F+ RT ET L + L +P + Y N W + +A +A +RP
Sbjct: 158 ANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDY--PVNRKWGLVIAALACAIRP 215
Query: 584 TSAPLWAVLTIYNL-LTTNXSK 646
TSA +W + + L LT N K
Sbjct: 216 TSAVIWLYVGMLELFLTPNKVK 237
>At5g14850.1 68418.m01741 mannosyltransferase, putative similar to
PIGB from Homo sapiens [gi:1552169], Mus musculus
[gi:7634741]
Length = 548
Score = 154 bits (373), Expect = 6e-38
Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
Frame = +2
Query: 68 PVQVVSFILFVRILSVFLVRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYLFPS 247
P ++ F L R+++ L++T++ PDE+WQ+LEVAH+ +F YG +TWEW+RGIRSYL P
Sbjct: 38 PRRIFLFCLAFRVVNALLIQTYFNPDEHWQSLEVAHRTIFGYGYMTWEWKRGIRSYLHPM 97
Query: 248 VVAVLYSILKVTGLDHPEAVILLPRILQAILSTAADYSFYKWT----GGR--KWALFLIL 409
+ A LY +L+VTGLD P +I PR++Q+I S D YK + GG W+LF +
Sbjct: 98 LFAFLYKLLQVTGLDTPYIMIKAPRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQM 157
Query: 410 TSWFWFYTSGRTLLQTTETALVAIALSVFP-FXSGKLGYYDKENTSW-IWLAVIAVFLRP 583
+WF F+ RT ET L + L +P + Y N W + +A +A +RP
Sbjct: 158 ANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDY--PVNRKWGLVIAALACAIRP 215
Query: 584 TSAPLWAVLTIYNL-LTTNXSK 646
TSA +W + + L LT N K
Sbjct: 216 TSAVIWLYVGMLELFLTPNKVK 237
>At1g61065.1 68414.m06875 expressed protein
Length = 180
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 374 TGGRKWALFLILTSWFWFYTSGRTLL 451
+G R WA+FL +T+W +F+ + LL
Sbjct: 84 SGSRSWAIFLFITTWVFFFIAQVCLL 109
>At4g01540.1 68417.m00200 no apical meristem (NAM) family protein
similar to NAC1 (GI:7716952) {Medicago truncatula};
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 423
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 122 VRTWYVPDEYWQTLEVAHKQVFHYGELTWEWQRGIRSYL-FPSVVAVLYSILKVTGLDHP 298
VRT +V EY T HK+ + ++ ++ + SY PS+V+ ++++ +TG P
Sbjct: 125 VRTPWVMHEYHITCLPHHKRKYVVCQVKYKGEAAEISYEPSPSLVSDSHTVIAITGEPEP 184
Query: 299 EAVILLP 319
E + P
Sbjct: 185 ELQVEQP 191
>At5g50140.1 68418.m06210 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 535
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 419 FWFYTSGRTLLQTTETALVAIALSVFPFXSGKLGYYDKENTSWIWLAVIAV 571
F ++ ++ T +V + LS+ PF + L + IWLAVIA+
Sbjct: 407 FKVFSVSNSIALFTSLCIVILLLSIIPFRTKSLKTFLIITHKMIWLAVIAM 457
>At2g27220.1 68415.m03271 homeodomain-containing protein
Length = 431
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 327 YKQYSVLQQTTVSINGQEVGSGLCSSFSHLGSGSI 431
YKQY QT +S Q G G +S++H+ +I
Sbjct: 150 YKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTI 184
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 227 RSYLFPSVVAVLYSILKVTGLDHPEAVILLPRILQAI 337
+S + + L SIL V LDHP+A L+ IL+++
Sbjct: 1958 KSMIDGGTIQCLTSILNVIDLDHPDAPKLVTLILKSL 1994
>At1g27420.1 68414.m03342 kelch repeat-containing F-box family
protein similar to MIPP proteins (gi|2191178,
sp|P28575); contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 346
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 509 GKLGYYDKENTSWIWLAVIAVFLRPTSAPLWAVLTIYN 622
G+LG +D E SW +VF+ P W L ++N
Sbjct: 267 GRLGVFDPEENSW-----SSVFVPPREGGFWVRLGVWN 299
>At5g13940.1 68418.m01630 hypothetical protein
Length = 395
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 188 HYGELTWEWQRGIRSYLFPS 247
H+ + TW W R S L PS
Sbjct: 54 HFADKTWVWDRSYESLLLPS 73
>At1g71680.1 68414.m08271 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GB: AAC49885 GI:2576361 from (Arabidopsis
thaliana); contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 434
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 398 FLILTSWFWFYTSGRTLLQTTETALVAIALSVFPFXSGKLGYY 526
+L+ T F T+ R + ++T AL+ + PF G LG++
Sbjct: 342 YLVKTLKFTPSTTLRLVARSTYVALICLVAVCIPFFGGLLGFF 384
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 227 RSYLFPSVVAVLYSILKVTGLDHPEAVILLPRILQAI 337
+S + + L SIL V LDHP+A L+ IL+++
Sbjct: 2178 KSMMDGGTIQCLTSILHVIDLDHPDAPKLVTLILKSL 2214
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,871,945
Number of Sequences: 28952
Number of extensions: 329772
Number of successful extensions: 868
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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