Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A22
(551 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 170 2e-41
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 144 1e-33
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 131 1e-29
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 122 7e-27
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 115 8e-25
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 111 8e-24
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 108 7e-23
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 103 4e-21
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 96 6e-19
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 88 1e-16
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 77 3e-13
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 73 6e-12
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 71 2e-11
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 69 1e-10
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 67 3e-10
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 67 3e-10
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 66 4e-10
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 64 3e-09
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 62 6e-09
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 57 3e-07
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 55 1e-06
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 52 9e-06
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 51 2e-05
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 50 5e-05
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 49 6e-05
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 48 1e-04
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 44 0.003
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.007
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 40 0.038
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 34 1.9
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 33 4.4
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 4.4
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 33 5.8
UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;... 33 5.8
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 32 7.7
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 170 bits (413), Expect = 2e-41
Identities = 78/105 (74%), Positives = 93/105 (88%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YI R+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 349 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDXGKY 483
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+ GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 59.3 bits (137), Expect = 6e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 72 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 144 bits (349), Expect = 1e-33
Identities = 69/105 (65%), Positives = 87/105 (82%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P SKELRQK+NV+SMP +KDDEVQVVRGHY+GQQ+GKV+QVYRKK+V+YI +++REKANG
Sbjct: 33 PLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQIGKVVQVYRKKYVIYIKQVEREKANG 92
Query: 349 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDXGKY 483
T VGIHPSK VI +LK+ +DRK IL+R+ +GK+ GKY
Sbjct: 93 TTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3
Query: 72 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
MKFN VTS R K HF+APSHI R +MSSPL
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPL 34
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 131 bits (316), Expect = 1e-29
Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Frame = +1
Query: 184 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGATA 357
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YI +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 358 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDXGKY 483
+VGIHPSK VI +LK++KDRK I +++AK A GK+ GKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 122 bits (293), Expect = 7e-27
Identities = 58/90 (64%), Positives = 74/90 (82%)
Frame = +1
Query: 214 PIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGATAYVGIHPSKCVIV 393
P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++ RI REK NG+T VGIHPSK V+
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVT 116
Query: 394 KLKMNKDRKAILDRRAKGRLAALGKDXGKY 483
KLK++KDRKAILDR+A GR A K GK+
Sbjct: 117 KLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 115 bits (276), Expect = 8e-25
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P S ELR K+NV+SMPIRKDDEV VVRG KG++ GKV VYR K+ +++ RI R+K+NG
Sbjct: 34 PLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTSVYRLKWAIHVERISRDKSNG 92
Query: 349 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 468
+ + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 93 QSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
Score = 41.9 bits (94), Expect = 0.010
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 81 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
N + SSRRK+R HF+APS RRV++S+PL
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPL 35
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 111 bits (268), Expect = 8e-24
Identities = 47/89 (52%), Positives = 71/89 (79%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SKELR K+ +++P+RKDDEV + RGH G++ GKV+++ RK+F +Y+ R+ REKANG +
Sbjct: 64 SKELRLKYKTRALPVRKDDEVLICRGHNHGRE-GKVVKINRKRFKIYVERVTREKANGES 122
Query: 355 AYVGIHPSKCVIVKLKMNKDRKAILDRRA 441
++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 123 TFIGIHPSNVILTKLKIDKNRKKILDRKA 151
Score = 56.0 bits (129), Expect = 5e-07
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = +3
Query: 36 VLSRVVLAKSDRMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
+L++++ + +MKFNKQ++S+RRK RK HF+AP+ +RR +MSS L
Sbjct: 18 LLTQIIFSPFSKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKL 63
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 108 bits (260), Expect = 7e-23
Identities = 50/95 (52%), Positives = 71/95 (74%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P SKELR ++ +K++PIR+DDEV VVRG KGQ+ GK+ VYR KF V + ++ +EK NG
Sbjct: 34 PLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISSVYRLKFAVQVDKVTKEKVNG 92
Query: 349 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 453
A+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 93 ASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
Score = 39.5 bits (88), Expect = 0.051
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 75 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
K + V+S RRK RK +F+APS RRVL+S+PL
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPL 35
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 103 bits (246), Expect = 4e-21
Identities = 47/98 (47%), Positives = 71/98 (72%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SK+LR+K+NV+++P+RKDDEV VVRG +KG + GKV VYRK++ + I ++ R KANG
Sbjct: 35 SKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMP 93
Query: 355 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 468
+ I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 94 YQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
Score = 33.9 bits (74), Expect = 2.5
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 72 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
MK + +V+S RRK R+ APS++R LMS+ L
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHL 34
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 95.9 bits (228), Expect = 6e-19
Identities = 46/92 (50%), Positives = 65/92 (70%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SKELR+K+NV ++PI KDDEV++++GH K GKV V R K+V+ I ++ + KANG T
Sbjct: 35 SKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKYVINIDKLTKTKANGQT 92
Query: 355 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 450
V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 93 VPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 72 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
MKFN +V+S+ K RK ++AP+ R +LMS+ L
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARL 34
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
+KE + VK +PIR+DDEV + G + G++ GKV+ V + + + REK NG T
Sbjct: 36 NKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQT 94
Query: 355 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 468
+V +HPS C+I KLKM+K RK +++RR GR L K
Sbjct: 95 VHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAK 132
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = +1
Query: 124 ISVLLHI*GEC*CPLPCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 303
++ LLH E P S LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K
Sbjct: 36 LTPLLHGVIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQK 94
Query: 304 FVVYIXRIQREK 339
V+++ RI EK
Sbjct: 95 RVIHVKRISHEK 106
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 72.5 bits (170), Expect = 6e-12
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P SK+L+++ ++ +P+R D V ++RG +KG + GKV +V K+ +Y+ +K +G
Sbjct: 32 PLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRIYVDSASFKKPSG 90
Query: 349 ATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 465
Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 91 EAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/86 (38%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 181 ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGATAY 360
ELR+KFN +S+P+R+ D V+++RG +KG + G+V++V K+ +Y+ E+ANG Y
Sbjct: 35 ELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GEVVEVDLKRLRIYVEGATIERANGEKVY 93
Query: 361 VGIHPSKCVIVKLKMNKD-RKAILDR 435
IHPS +I++ ++ R+ I++R
Sbjct: 94 YPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 68.5 bits (160), Expect = 1e-10
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P S EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + I + R+KA+G
Sbjct: 9 PLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKADG 67
Query: 349 ATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 441
Y+ IH SK I KL N RK I++R+A
Sbjct: 68 TPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 66.9 bits (156), Expect = 3e-10
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SKELR + +K+MPIR+ D V++ G +KG GKV++V R+ + + + I ++ N
Sbjct: 35 SKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRDYKICVEGINQKARNPEA 92
Query: 355 AYV--GIHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 468
V IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 93 KPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
Score = 36.3 bits (80), Expect = 0.47
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 72 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
MK N VT+SRRK RK +F+A + R +MSS L
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRL 34
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 66.9 bits (156), Expect = 3e-10
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
S++L +++ +K + IRK D V+++RG G + GKV++V RK+ V I + ++KA+G
Sbjct: 30 SEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRGRVAIEGLTKKKADGTP 88
Query: 355 AYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGRLAALGKDXGK 480
YV +H SK +I KL +K+R ++R+ K R K K
Sbjct: 89 VYVWVHASKVIITKLDTGDKERMDAIERKRKMREEYFSKKSPK 131
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 66.5 bits (155), Expect = 4e-10
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P S EL+QK +K + +RK D V +VRG +KG + GKV V KK +++ KA+G
Sbjct: 32 PLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKGRIHVEGATLRKADG 90
Query: 349 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 444
IHPSK V+ +L ++ R+ L R K
Sbjct: 91 TEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
S EL+ + ++PIR +DEV+V RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 54 SAELKAQHGANAVPIRVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Frame = +3
Query: 42 SRVVLAKSDR---MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
+RV LA S R MK++ VTSSRRK RK HF+APS RR LMS+ L
Sbjct: 7 TRVRLAVSLRRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAAL 53
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 62.5 bits (145), Expect = 6e-09
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SKEL++K ++P+RK D V+++RG +KG + G+V++V K++ +Y+ ++ +G
Sbjct: 33 SKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGRE 91
Query: 355 AYVGIHPSKCVIVKLKMNKDRK 420
IHPS +I+KL +KD K
Sbjct: 92 VPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
S+ELR+++ ++ P+R D V V G + G++ G + ++ + + VYI K +G
Sbjct: 36 SRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRDYKVYIEGCFVTKNDGTN 94
Query: 355 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 450
A V I+PSK I K + RK L+R+ + R
Sbjct: 95 ALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKG 264
S ELR K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 35 SSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
Score = 50.0 bits (114), Expect = 4e-05
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3
Query: 72 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 173
MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 52.0 bits (119), Expect = 9e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V + I K +G
Sbjct: 10 SKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGKQ 68
Query: 355 AYVGIHPSKCVIVKLKMNKDRK 420
GI P K I L +++ +
Sbjct: 69 KGFGISPEKLQITHLDLSRSER 90
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/84 (34%), Positives = 53/84 (63%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P SKELR+K ++++PI+ D V+V RG+++G++ G+V+ + K + VY+ + ++
Sbjct: 44 PLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYRVYLS-LDTDR--- 98
Query: 349 ATAYVGIHPSKCVIVKLKMNKDRK 420
HPSK I+KL ++ D+K
Sbjct: 99 ---QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SK+L++K+ +S+ + + D V ++RG +KG GKV +V K V I +++EK G
Sbjct: 28 SKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEKTKGDK 86
Query: 355 AYVGIHPSKCVIVKL 399
V IH S ++ L
Sbjct: 87 FDVFIHTSNLLVTSL 101
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 49.2 bits (112), Expect = 6e-05
Identities = 32/77 (41%), Positives = 41/77 (53%)
Frame = +1
Query: 169 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANG 348
P SKELR K+ +S+ + + D V VVRG YK GKV V + V I I++EK G
Sbjct: 26 PLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESGSVAIEGIKKEKGKG 84
Query: 349 ATAYVGIHPSKCVIVKL 399
V I SK V+ L
Sbjct: 85 DKFDVLIRASKVVVTGL 101
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
SKE+++ K++ ++K+ E++V RG +KG + GKV+Q+ ++ +++ I R K
Sbjct: 35 SKEMQKYHKKKTLILKKNYEIKVKRGDFKG-KTGKVIQIKPEQQKIFVDNIFRNKFEKTN 93
Query: 355 AYVGIHPSKCVIVKL 399
+V + PS I+K+
Sbjct: 94 IFVPLKPSNIQIIKI 108
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +1
Query: 175 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGAT 354
S+ L +++ +S + D V+++RG +KG + GKV V + + + K +G
Sbjct: 36 SEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GKVQSVSLMDGTIAVDGVISTKVDGTE 94
Query: 355 AYVGIHPSKCVIVKLKMNKDRKA 423
I+PS +I KL+M R+A
Sbjct: 95 VPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.007
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 72 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 170
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 39.9 bits (89), Expect = 0.038
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 202 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREKANGATAYVGIHP 375
+K IRKDD+V V+ G KG ++GKV++V RKK R+ EK N A ++ +P
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKK-----DRVLVEKVNVAKRHMRANP 52
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 34.3 bits (75), Expect = 1.9
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 211 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYI 318
M ++K D V V G YKG +VGKV +V KK+ V +
Sbjct: 5 MHVKKGDTVLVASGKYKG-RVGKVKEVLPKKYAVIV 39
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 33.1 bits (72), Expect = 4.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 487 RCIYXCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 362
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 33.1 bits (72), Expect = 4.4
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 211 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIXRIQREK 339
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 526 YLFKRPPWLWQFPRCIYXCLCQVQPVCPLLCDRGLLCG 413
YL P W W FP L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, GntR family - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 32.7 bits (71), Expect = 5.8
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 166 LPCSKELRQKFNVKSMPIRKDDEVQVVRGH-YKGQQVGKVMQVYRK 300
LP +EL +KFNV IRK E+ V +G+ Y+ Q G ++ + K
Sbjct: 27 LPTEEELIKKFNVSKNTIRKAIEILVTKGYVYRVQGSGIFLREFAK 72
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 32.7 bits (71), Expect = 5.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 318 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 223
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 32.3 bits (70), Expect = 7.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 513 GLHGCGSFLGVFTXVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL 379
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 32.3 bits (70), Expect = 7.7
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 217 IRKDDEVQVVRGHYKGQQVGKVMQVYRK 300
I+K D V VVRG KG+Q GKV++VY +
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVYER 32
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,956,502
Number of Sequences: 1657284
Number of extensions: 10229784
Number of successful extensions: 25689
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 24869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25656
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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