Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_A17
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122238-1|AAM52750.1|  896|Drosophila melanogaster SD01014p pro...   107   1e-23
AE013599-3903|AAF47230.1|  880|Drosophila melanogaster CG12252-P...   105   5e-23

>AY122238-1|AAM52750.1|  896|Drosophila melanogaster SD01014p
           protein.
          Length = 896

 Score =  107 bits (257), Expect = 1e-23
 Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 9/136 (6%)
 Frame = +3

Query: 201 SEKPVKLAKWKIKQGTVVTQGQVLFLYKDLXGDGEX---------LKKFKSSHAGTVSSI 353
           +E    + KW++++G  V+  Q+LFLY+ +  D +          ++++KS  AG V   
Sbjct: 82  NEARAVINKWRVREGQFVSAAQILFLYQPVGVDAKDAGKPGGDCAIQRYKSQRAGVVKKR 141

Query: 354 XVKEGXVXXPSSAVAXLEECRHPTVMMXMCAECGADLRSEETXKLDVAIVPMVHSVPELK 533
             KEG +     A+  L EC H TV+  MCA+CGADLR  E  +   A VPMVH++P+LK
Sbjct: 142 LRKEGELLTKGDAILELSECIHTTVIKDMCADCGADLRQNENGQTSEASVPMVHTMPDLK 201

Query: 534 VSEQLAQKLRKEDAER 581
           V+++LAQKL  +D  R
Sbjct: 202 VTQKLAQKLGHDDTRR 217


>AE013599-3903|AAF47230.1|  880|Drosophila melanogaster CG12252-PA
           protein.
          Length = 880

 Score =  105 bits (252), Expect = 5e-23
 Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 12/139 (8%)
 Frame = +3

Query: 201 SEKPVKLAKWKIKQGTVVTQGQVLFLYKDLXGDGEXLK------------KFKSSHAGTV 344
           +E    + KW++++G  V+  Q+LFLY+ +  D +  K            ++KS  AG V
Sbjct: 63  NEARAVINKWRVREGQFVSAAQILFLYQPVGVDAKDAKDAGKPGGDCAIQRYKSQRAGVV 122

Query: 345 SSIXVKEGXVXXPSSAVAXLEECRHPTVMMXMCAECGADLRSEETXKLDVAIVPMVHSVP 524
                KEG +     A+  L EC H TV+  MCA+CGADLR  E  +   A VPMVH++P
Sbjct: 123 KKRLRKEGELLTKGDAILELSECIHTTVIKDMCADCGADLRQNENGQTSEASVPMVHTMP 182

Query: 525 ELKVSEQLAQKLRKEDAER 581
           +LKV+++LAQKL  +D  R
Sbjct: 183 DLKVTQKLAQKLGHDDTRR 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,728,865
Number of Sequences: 53049
Number of extensions: 530539
Number of successful extensions: 1087
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)