Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_A17
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical pr...    62   4e-10
Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical
           protein F36F2.6 protein.
          Length = 659

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
 Frame = +3

Query: 231 KIKQGTVVTQGQVLFLYKDLXGDGEXLKKFKSSHAGTVS-SIXVKEGXVXXPSSAVAXLE 407
           K  +G+ V +  VL  +K    +G+   K K+   G V+    +K G V      +A + 
Sbjct: 18  KASEGSFVLKDHVLIEFKI---NGKVAGKIKTPCEGVVTFGKGLKPGIVLNKGQVIATVS 74

Query: 408 ECRHPTVMMXMCAECGADLRSE-----ETXKLDVAIVPMVHSVPELKVSEQLAQKLRKED 572
           EC H  V+  MCA CG DLR +     +  +   A V M+H VPEL VS+ LA+++   D
Sbjct: 75  ECTHAIVIKDMCATCGKDLREKGGRAGQRKEQSTANVSMIHHVPELIVSDTLAKEIGSAD 134


>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -1

Query: 479 GLLAAEVCSTLRAHXHHHCWMAAFFQXCYSRTRXXYVSFFH 357
           G++   +C T   +   HCW+  F +      R  Y++++H
Sbjct: 283 GIIPGIICMTSLFYGLLHCWLNCFSEMMQFADRQFYLNWWH 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,923,760
Number of Sequences: 27780
Number of extensions: 279681
Number of successful extensions: 664
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)