Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A16
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 198 4e-52
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 195 5e-51
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 175 6e-45
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 161 8e-41
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 137 1e-33
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 135 6e-33
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 124 1e-29
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 111 1e-25
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 109 3e-25
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 82 6e-17
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 81 1e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 76 4e-15
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 74 2e-14
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 71 1e-13
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 70 3e-13
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 61 1e-10
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 60 4e-10
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 55 8e-09
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 43 4e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 43 4e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 39 7e-04
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 36 0.007
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 30 0.34
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 4.1
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.2
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 25 9.5
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 25 9.5
SPBC1105.17 |cnp1|sim2|CENP-A|Schizosaccharomyces pombe|chr 2|||... 25 9.5
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 198 bits (484), Expect = 4e-52
Identities = 94/171 (54%), Positives = 126/171 (73%)
Frame = +2
Query: 137 CVKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKL 316
C + Y YLFK ++IGD+GVGKS LL++FT F TIGVEF R I +D K+IK
Sbjct: 2 CQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKA 61
Query: 317 QIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLI 496
QIWDTAGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+H++SN+VIML+
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLV 121
Query: 497 GNKSDLESRREVNXEXXEAFAREHGLVFMETSAKTAANVEEAFINTAXEIY 649
GNK+DL R V+ E +AFA E+ L F+ETSA A+NVEEAF EI+
Sbjct: 122 GNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIF 172
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 195 bits (475), Expect = 5e-51
Identities = 89/166 (53%), Positives = 122/166 (73%)
Frame = +2
Query: 149 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 328
+Y YL K ++IGD+GVGKSCLLL+F++ F P TIG++F R I +DGK+IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 329 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKS 508
TAGQE FR+IT +YYRGA G LL+YD+T +++F+++ TW + QH++ N+ +LIGNK
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKC 124
Query: 509 DLESRREVNXEXXEAFAREHGLVFMETSAKTAANVEEAFINTAXEI 646
D E +R+V+ E +A A E G+ F+E SAKT NV+EAF A EI
Sbjct: 125 DCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 175 bits (425), Expect = 6e-45
Identities = 78/168 (46%), Positives = 118/168 (70%)
Frame = +2
Query: 152 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 331
Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R ++GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 332 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 511
AGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL++ +++ + +L+GNKSD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 512 LESRREVNXEXXEAFAREHGLVFMETSAKTAANVEEAFINTAXEIYDK 655
+ ++ V + FA + F+ETSAK + NVE+AF+ + +I ++
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKER 172
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 161 bits (391), Expect = 8e-41
Identities = 78/173 (45%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
Frame = +2
Query: 143 KMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI----DGKQI 310
K +Y YL K ++ G +G GKSCLL +F ++ T+G++F +R+I++ K+I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 311 KLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIM 490
KLQIWDTAGQE FRS+ R+YYRGAAGA+LVYD+T +++F L++WL D R + S + ++
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 491 LIGNKSDLESRREVNXEXXEAFARE-HGLVFMETSAKTAANVEEAFINTAXEI 646
L G+KSDL+++R+V+ E F E H ETS+ T +NVEE F++ I
Sbjct: 123 LAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTI 175
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 137 bits (331), Expect = 1e-33
Identities = 61/154 (39%), Positives = 100/154 (64%)
Frame = +2
Query: 164 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 343
FK + +G+ VGK+ L+ +F +F + TIG++F ++ + ++ + ++LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 344 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 523
FRS+ SY R ++ A++VYDIT +F + W+ED R +++I+L+GNK+DL +
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 524 REVNXEXXEAFAREHGLVFMETSAKTAANVEEAF 625
R+V E E A+E ++ METSAK NV+ F
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLF 165
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 135 bits (326), Expect = 6e-33
Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-GKQIKLQIWDTAGQE 343
K +++GD+ VGKS L+L+F +F + TIG F + + ID +KL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 344 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL-ES 520
++S+ YYR A A++VYDIT+ + +W+++ ++ + +VI L GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 521 RREVNXEXXEAFAREHGLVFMETSAKTAANVEEAFINTAXEI 646
RR V EA+A E L+F ETSAKTA NV E F A ++
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 124 bits (299), Expect = 1e-29
Identities = 66/166 (39%), Positives = 104/166 (62%), Gaps = 6/166 (3%)
Frame = +2
Query: 158 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 337
+L K II+G++GVGK+ ++ Q+ +++F + TIG +F + + +D K + LQ+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 338 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSN---MVIMLIGNK 505
QE F+S+ ++YRGA +LVYD+ ++F L +W ++ Q S SN +L+GNK
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNK 126
Query: 506 SDL-ESRREVNXEXXEAFAREHG-LVFMETSAKTAANVEEAFINTA 637
D+ E +R V+ AF + G + + ETSAK A NV+EAF A
Sbjct: 127 VDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVA 172
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 111 bits (266), Expect = 1e-25
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Frame = +2
Query: 140 VKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ 319
++ Y +K +++GD GVGKS L +Q F +D TI + + IDG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGEGALLD 59
Query: 320 IWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNMVIMLI 496
+ DTAGQE + ++ Y R G LLVY+IT R +F+ ++T+ + R ++L+
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 497 GNKSDLESRREVNXEXXEAFAREHGLVFMETSAKTAANVEEAFINTAXEI 646
NK DLE+ R V+ E A+ +++ETSAK NVEEAF + I
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 109 bits (263), Expect = 3e-25
Identities = 53/160 (33%), Positives = 98/160 (61%), Gaps = 7/160 (4%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 346
K +I+GD+GVGK+CL+ QF +++F + TIG +F + + +D K + LQ+WDTAGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 347 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSN---MVIMLIGNKSDLE 517
F+S+ ++YRGA ++VY++ ++F+ + W ++ ++ + +++GN+ D +
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 518 -SRREVNXEXXEAFAR-EHG--LVFMETSAKTAANVEEAF 625
S+R V+ + + +HG ++ E SAK NV + F
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLF 169
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 82.2 bits (194), Expect = 6e-17
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = +2
Query: 176 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 355
++G VGKS L +Q+ + F + TI F ++ I G++ +I DTAGQ+ +
Sbjct: 11 VLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDEYSI 69
Query: 356 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMV-IMLIGNKSDLESRREV 532
+ + G G +LVY IT + +F + + H+ + V I+++GNKSDL +R V
Sbjct: 70 LNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAV 129
Query: 533 NXEXXEAFAREHGLVFMETSAKTAANVEEAF 625
E +A A E + E SA+ NV AF
Sbjct: 130 TAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 81.4 bits (192), Expect = 1e-16
Identities = 47/161 (29%), Positives = 83/161 (51%)
Frame = +2
Query: 164 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 343
FK +++GD G GK+ + + F+ + T+GVE + +I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 344 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 523
+ YY ++++D+T R T+ ++ W D + N+ I+L GNK D++ R
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVC-ENIPIVLCGNKVDVKER 128
Query: 524 REVNXEXXEAFAREHGLVFMETSAKTAANVEEAFINTAXEI 646
+ V + F R+ L + + SAK+ N E+ F+ A ++
Sbjct: 129 K-VKAKAI-TFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 76.2 bits (179), Expect = 4e-15
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Frame = +2
Query: 176 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 355
+IGD+ +GK+ L++ + F T+GV F + I+I +I IWD GQ F +
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 356 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD------LE 517
+ A L ++D++R+ T N + W AR N V +LIG K D E
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYDHFMTFPRE 133
Query: 518 SRREVNXEXXE-AFAREHGLVFMETSAKTAANVEEAFINTAXEIYD 652
+ E+ + A A + LVF TS + NV++ F +++D
Sbjct: 134 DQEEITKQARRYAKAMKASLVFCSTS--HSINVQKIFKIVLAKVFD 177
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 73.7 bits (173), Expect = 2e-14
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 346
K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ I+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 347 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLE-- 517
+ + Y + L+ + + E+ +++ W+ + H SN+ I+L+G K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDLRND 125
Query: 518 ----------SRREVNXEXXEAFAREHGLV-FMETSAKTAANVEEAFINTA 637
S++ + E + A++ G ++E SAK V E F A
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAA 176
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 70.9 bits (166), Expect = 1e-13
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 346
K +I+GD GK+ LL FT F V++ TI + I +DG I+L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 347 FRSITRSYYRGAAGALLVYDITRRETF-NHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 523
+ + Y ++ + + R++ N +T WL + + + ++L+ K DL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-PGVKLVLVALKCDLRGA 132
Query: 524 REVNXEXXEAFAREHGLV---------FMETSAKTAANVEEAFINTA 637
E + + E GL ++E SAK V EAF A
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAA 179
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 69.7 bits (163), Expect = 3e-13
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 346
K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 347 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLE-- 517
+ + Y + L+ + + ++ +++ W+ + H S++ I+L+ K+DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADLRND 125
Query: 518 ----------SRREVNXEXXEAFAREHGLV-FMETSAKTAANVEEAF 625
++ V E +A A++ G ++E SAKT V E F
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVF 172
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 61.3 bits (142), Expect = 1e-10
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI--DGKQIKLQIWDTAGQ 340
K +++GD G GK+CLL+ F+ F + T+ + IT + K I+L +WDTAGQ
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENY-ITDITYGPNSKVIELALWDTAGQ 74
Query: 341 EAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLE 517
E + + Y + LL + I + N++T W + QH I+L+G K+DL
Sbjct: 75 EEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLR 133
Query: 518 SRRE------------VNXEXXEAFAREHGLVFMETSAKTAANVEEAF 625
R V + ++ A ++E SAK V E F
Sbjct: 134 KDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 59.7 bits (138), Expect = 4e-10
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 346
K +++GD GK+ LL FT F + T+ + + +DGK ++L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDC-RVDGKSVQLALWDTAGQEE 68
Query: 347 FRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLIGNKSDLES 520
+ + Y A L+ + I ++ +++T W+E+ N+ +L+G K+DL S
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLRS 126
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 55.2 bits (127), Expect = 8e-09
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 346
K +++GD VGK+CLL+ +T +F + T+ + A + I + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNY-AVTVMIGDEPYTLGLFDTAGQED 63
Query: 347 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL--- 514
+ + Y L+ + +T +F ++ W + H + +++G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDLRDD 122
Query: 515 ---------ESRREVNXEXXEAFAREHGLV-FMETSAKTAANVEEAF 625
+ + + E E ARE G V ++E SA T ++ F
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 42.7 bits (96), Expect = 4e-05
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 454
G + T++ + I +WD GQ+ R + R Y++ G + V D RE + L+
Sbjct: 50 GFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQR 109
Query: 455 ARQHSNSNMVIMLI-GNKSDL 514
++L+ NK DL
Sbjct: 110 MLNEDELRDALLLVFANKQDL 130
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 42.7 bits (96), Expect = 4e-05
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 346
+ +++G GK+ +L + K Q V +TI G + T+ K IK +WD GQ+
Sbjct: 23 RILMLGLDAAGKTTILYKL--KLNQSV--VTIPT-VGFNVETVTYKNIKFNVWDVGGQDK 77
Query: 347 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNMVIMLIGNKSDL 514
R + R Y+ G G + V D + L + +++++ NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 38.7 bits (86), Expect = 7e-04
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Frame = +2
Query: 272 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVY----DITRRETFNHLT 439
FG ++ T++ + ++ IWD GQ+ R+ ++Y+ + V D+ E N L
Sbjct: 48 FGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQ 107
Query: 440 TWLEDARQHSNSNMVIMLIGNKSDLE---SRREVN-XEXXEAFAREHGLVFMETSAKTAA 607
L + + S I+++ NKSD+ S E++ + H +F SA T
Sbjct: 108 ELLVEEKLLFTS---ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIF-SVSALTGL 163
Query: 608 NVEEA 622
N+++A
Sbjct: 164 NIKDA 168
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 35.5 bits (78), Expect = 0.007
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Frame = +2
Query: 167 KYIIIGDTGVGKSCLL-LQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 343
K +++G +G GKS + + F++ + L ++ + G + L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 344 AFR----SITRSY-YRGAAGALLVYDITRRETFNHLTTW---LEDARQHSNSNMVIMLIG 499
AF S R + +R + V+D+ RE L T+ LE +S V LI
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCLI- 121
Query: 500 NKSDL--ESRREVNXEXXEAFARE 565
+K DL E R++ E +A E
Sbjct: 122 HKMDLVQEDLRDLVFEERKAILLE 145
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 29.9 bits (64), Expect = 0.34
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -1
Query: 394 QSASRAPVVRSGDGPKSFLTSCVPNLQLDLLAINCDHPSTKFNTNSEI 251
Q+ + A V S P S+LTSC+P++++ L + P+ F +E+
Sbjct: 358 QTLACAKEVESERAPTSYLTSCLPSIKVILARVLESSPAFGFIERNEL 405
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 185 DTGVGKSCLLL--QFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 331
D + LLL Q D+ + V +LT+ + G ++ + K ++WD+
Sbjct: 440 DISMQNEALLLRKQENDRLVKQVEELTVALNSGKMNAIVEAESSKNELWDS 490
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 137 CVKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFG 277
CV+ + F +++G++G GKS L+ ++ P ++ +FG
Sbjct: 89 CVRQGFN--FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFG 133
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 173 IIIGDTGVGKSCLL 214
I++GDT GK+C+L
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = +2
Query: 419 ETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVNXEXXEAFAREHGLVFMETSAK 598
+T HL ++ D ++ NSN+ + S E++ + N + G TS
Sbjct: 25 KTTVHLNSFKNDPKKELNSNLNEKSVEESSKNETKEQFNSSSIPRESESEGKTASNTSPL 84
Query: 599 TAANVE 616
+ VE
Sbjct: 85 SPKKVE 90
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 173 IIIGDTGVGKSCLLLQFTDKRF 238
++IG TG GKS L +Q KRF
Sbjct: 7 VVIGTTGAGKSDLAVQLA-KRF 27
>SPBC1105.17 |cnp1|sim2|CENP-A|Schizosaccharomyces pombe|chr
2|||Manual
Length = 120
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 413 RRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVNXEXXEAFAREHGLVFMETS 592
R++ + TT L + R++ S +LI RE++ E F+ + GL + T+
Sbjct: 18 RKKRYRPGTTALREIRKYQRSTD--LLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTA 75
Query: 593 AKTAANVEEAFI 628
+ EAF+
Sbjct: 76 LQCLQEAAEAFL 87
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,436,554
Number of Sequences: 5004
Number of extensions: 48826
Number of successful extensions: 188
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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