Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_A16
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.9  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 123 PFTNIVLKWHTPIFLNTSSSGTQVWVNHVYSFNSRTKDSNRCMI 254
           P TNI  K +  +    +     ++ +H+ S     +D  RC I
Sbjct: 53  PLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNI 96


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 295 NCDHPSTKFNTNSEIMH 245
           NC+H  TKF  + ++ H
Sbjct: 183 NCNHLMTKFEPDLDMNH 199


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 573 RPCSRANASXXSLFTSRRDSRSLL 502
           R   +ANA    LFT   D+R +L
Sbjct: 190 RLSKKANARAVVLFTRAEDARGIL 213


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 573 RPCSRANASXXSLFTSRRDSRSLL 502
           R   +ANA    LFT   D+R +L
Sbjct: 280 RLSKKANARAVVLFTRAEDARGIL 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,357
Number of Sequences: 438
Number of extensions: 3542
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)