Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A14
(643 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 120 4e-26
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 98 2e-19
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 97 3e-19
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 94 3e-18
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 89 8e-17
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 87 3e-16
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 84 2e-15
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 82 1e-14
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 82 1e-14
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 78 2e-13
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 76 6e-13
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 75 1e-12
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 73 6e-12
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 64 3e-09
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 64 4e-09
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 56 5e-07
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 50 4e-05
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 41 0.022
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.051
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.12
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 36 0.83
UniRef50_UPI0000ECD41A Cluster: interphotoreceptor matrix proteo... 36 1.1
UniRef50_Q5ANA6 Cluster: Cytoplasmic dynein heavy chain; n=1; Ca... 34 2.5
UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497 ... 33 4.4
UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like; n... 33 4.4
UniRef50_A5K3G5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 33 7.7
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 33 7.7
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 120 bits (288), Expect = 4e-26
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 7e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/90 (48%), Positives = 58/90 (64%)
Frame = +2
Query: 80 GHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVR 259
GHFHK WQ+ VK WFNQP ++ RRK LRP+V CP+ RY +KVR
Sbjct: 11 GHFHKKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHCPSERYKSKVR 69
Query: 260 AGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
AGRGFT +E++ AG++ +AR+ G+AV PR
Sbjct: 70 AGRGFTFQELKQAGMSDKYARSFGVAVDPR 99
Score = 49.2 bits (112), Expect = 8e-05
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFPKGK-KVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRN+ ES+ N+Q + EY++RLI P K KVLK + + L V+
Sbjct: 98 PRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVLKIDDGKN-----------LNVVKV 146
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIR 629
K A + E EK F+A+ LR AR K GIR
Sbjct: 147 VPGKVKALKVGEEEKKFEAFVTLRRARCDEKFAGIR 182
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 97.1 bits (231), Expect = 3e-19
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = +2
Query: 83 HFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRA 262
HF KDWQR VK WF+QP + RR+ LRP VRCPT+RY+TK+R+
Sbjct: 13 HFRKDWQRRVKVWFDQPGAKKRRR-TAREAKAAKLGLRPVQLLRPAVRCPTLRYNTKIRS 71
Query: 263 GRGFTLREIRAAGLNPVFARTIGIAVXPR 349
GRGFT+ E++AAGL +AR++GI V R
Sbjct: 72 GRGFTIEEVKAAGLGKKYARSVGIPVDHR 100
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/91 (38%), Positives = 49/91 (53%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFPKGKKVLKGEANEQXRKLATQLRGPLMPVQQPAP 530
RRNKS ESL++NV+ IK Y+ARL++ PK K K + + A + ++P+
Sbjct: 101 RRNKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTE 160
Query: 531 KSVARPITEXEKNFKAYQYLRGARSIAKLVG 623
R IT EK F AY+ LR AR + G
Sbjct: 161 AEKPRAITSEEKEFNAYETLRKARGTHRAAG 191
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 93.9 bits (223), Expect = 3e-18
Identities = 43/88 (48%), Positives = 58/88 (65%)
Frame = +2
Query: 86 FHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 265
FHKDWQR V+ F+QP R++RR++ + LRP+VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVG 89
Query: 266 RGFTLREIRAAGLNPVFARTIGIAVXPR 349
RGFTL E++ AG+ ART+GIAV R
Sbjct: 90 RGFTLAELKEAGIPKKLARTVGIAVDHR 117
Score = 38.3 bits (85), Expect = 0.16
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFPKGK---KVLKGEANE-QXRKLA----------T 488
R N S ESL NV +K+Y+ARLILFP+ K L A+E K A T
Sbjct: 118 RVNYSKESLVANVARLKDYKARLILFPRKSGQFKKLDSSADEVNAAKAAFAAEGKTEGYT 177
Query: 489 QLRGPLMPVQQPAPKSVARPITEXEKN------FKAYQYLRGARSIAKLVGIR 629
G + P++ S A +TE +++ AY+ LR RS A+ GIR
Sbjct: 178 TKLGAIFPIKN---ISAAEAVTEVKRDELPKGEEAAYRRLRETRSEARYKGIR 227
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 89.0 bits (211), Expect = 8e-17
Identities = 42/91 (46%), Positives = 55/91 (60%)
Frame = +2
Query: 77 TGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 256
+ HF K WQ +VKTWFNQPAR+ RR+ LRP+V T++Y+ KV
Sbjct: 9 SSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKV 68
Query: 257 RAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
RAG+GFTL E++ AG+ A TIGI+V R
Sbjct: 69 RAGKGFTLEELKVAGIPKKLAPTIGISVDHR 99
Score = 66.1 bits (154), Expect = 7e-10
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQPA 527
R+N+S+E LQ NVQ +K Y+A+L++FP + ++V G++ + ATQ++G MP+
Sbjct: 100 RKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVK 159
Query: 528 PKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
+T K FKAY +R R+ A+ G RA
Sbjct: 160 AAMELVKLTADLKAFKAYDKIRLERTNARHAGARA 194
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/92 (45%), Positives = 57/92 (61%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HF K WQ V+ F+Q ++ R+Q+ + LRP+VR PTV+Y+ K
Sbjct: 10 LNNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRK 68
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGFTL E++A G+ P +ARTIGI+V R
Sbjct: 69 VRAGRGFTLAELKAVGIAPKYARTIGISVDHR 100
Score = 55.2 bits (127), Expect = 1e-06
Identities = 36/93 (38%), Positives = 53/93 (56%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFPKGKKVLKGEANEQXRKLATQLRGPLMPVQQPAP 530
R+NKS E+ NV ++EY+++L++F K K + + EQ AT PV+QPAP
Sbjct: 101 RQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT------FPVEQPAP 154
Query: 531 KSVARPITEXEKNFKAYQYLRGARSIAKLVGIR 629
+S R + E+ AY+ LR AR+ K GIR
Sbjct: 155 ESGLRAVEVPEQT--AYRTLRLARNEKKYKGIR 185
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/89 (48%), Positives = 50/89 (56%)
Frame = +2
Query: 83 HFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRA 262
H K W VKT+F+ PAR RR+ LRPIVRCPTVRY+ K R
Sbjct: 33 HLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTVRYNMKTRL 92
Query: 263 GRGFTLREIRAAGLNPVFARTIGIAVXPR 349
GRGFT +E+ AAG +P AR GIAV R
Sbjct: 93 GRGFTPKELVAAGFDPALARFQGIAVDAR 121
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/91 (45%), Positives = 54/91 (59%)
Frame = +2
Query: 83 HFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRA 262
H+HK+++R++KTW+NQP R+ R+ LRPIV PT RY+ K R
Sbjct: 11 HYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQRYNMKTRL 69
Query: 263 GRGFTLREIRAAGLNPVFARTIGIAVXPR*T 355
GRGFTL E+ A G+N A +IGIAV R T
Sbjct: 70 GRGFTLEELSACGINKKAAMSIGIAVDHRRT 100
Score = 40.3 bits (90), Expect = 0.039
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKG-------EANEQXRKLATQLRGPL 506
R + S E+ QINV +K+Y ++L P KGKK KG A E+ + L
Sbjct: 99 RTDLSEETFQINVDRLKKYINGIVLQPRKGKKTKKGFAGIPNDSAREEFKALKNVSHEKA 158
Query: 507 MPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
P++ IT E+ F+A+ LR AK G +A
Sbjct: 159 FPIKAQTLAVKTHVITPEERKFRAFSTLRKQFIEAKNFGKKA 200
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = +2
Query: 83 HFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRA 262
H K W RFVKT++NQPA + RR+Q LRP+VR T++Y++ +
Sbjct: 11 HMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQTIKYNSVQKL 69
Query: 263 GRGFTLREIRAAGLNPVFARTIGIAVXPR 349
GRGF+L E++ AGLN FART+GI+V R
Sbjct: 70 GRGFSLIELKEAGLNAAFARTVGISVDHR 98
Score = 41.5 bits (93), Expect = 0.017
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFPK--GKK---VLKGEANEQXRKLATQLRGPLMPV 515
RRN + E L NV+ +K Y ++L+L+P+ GK V+K NE Q P +
Sbjct: 99 RRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLT 158
Query: 516 QQPAPKSVARPITEXEKNFK-AYQYLRGARSIAKLVGIR 629
Q PK + E K Y+ LR AK VG++
Sbjct: 159 FQRTPKREKATVISKELRAKNVYRRLRQEWYNAKFVGVK 197
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/88 (44%), Positives = 51/88 (57%)
Frame = +2
Query: 86 FHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 265
F KDW+ V TW QP R+ RR Q + L+P V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLG 70
Query: 266 RGFTLREIRAAGLNPVFARTIGIAVXPR 349
RGF+L+E+RAA ++ ARTIGIAV PR
Sbjct: 71 RGFSLKELRAAKIDKNLARTIGIAVDPR 98
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 76.2 bits (179), Expect = 6e-13
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +2
Query: 110 VKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 289
VK +FNQPA++ RR++ + LRP V CPTVRY+ K R GRGF+L E+
Sbjct: 38 VKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSLEEL 96
Query: 290 RAAGLNPVFARTIGIAVXPR 349
+AAG+ P +ARTIGI V R
Sbjct: 97 KAAGVKPRYARTIGIRVDRR 116
Score = 57.2 bits (132), Expect = 3e-07
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLR-----GPLMP 512
R+NKS E + INVQ +K Y ++L+LFP KK KG+A E+ K ATQ R +
Sbjct: 117 RKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDRSRYGTAAVGG 176
Query: 513 VQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIR 629
+ PA + R +TE E K Y++L+ S + R
Sbjct: 177 LVTPA-REAPRKVTEEESTKKMYKFLKKNHSAVRFFRAR 214
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 209 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+V P+
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPK 59
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/89 (42%), Positives = 49/89 (55%)
Frame = +2
Query: 83 HFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRA 262
H HK WQR+V+ FN+ +R +R+ L P+V CPT RY+ K R
Sbjct: 12 HLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQRYNYKTRL 70
Query: 263 GRGFTLREIRAAGLNPVFARTIGIAVXPR 349
G+GFTL EI+A L P AR+IGI V R
Sbjct: 71 GKGFTLEEIKAVKLTPSAARSIGIIVDKR 99
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 80 GHFHKDWQRFVKTWFNQPARRY-RRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 256
GHF K W+ V T FNQP + RRK L+P+V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 257 RAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
+ GRGF+++EI+ + + A + GI++ R
Sbjct: 70 KLGRGFSIQEIKKSMIKLKTATSYGISIDKR 100
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/93 (38%), Positives = 50/93 (53%)
Frame = +2
Query: 83 HFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRA 262
H K RFVK NQ ++ RR+ LRP+V P+ RY+ K+R
Sbjct: 12 HRVKCSHRFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHMPSRRYNYKLRF 70
Query: 263 GRGFTLREIRAAGLNPVFARTIGIAVXPR*TQQ 361
GRGFTL+E++ AGL AR++G+AV R T +
Sbjct: 71 GRGFTLQELKVAGLGKKVARSVGVAVDHRRTNK 103
Score = 56.0 bits (129), Expect = 7e-07
Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = +3
Query: 351 RRNKSVESLQINVQXIKEYRARLILFPKGKKVLKGEA-------NEQXRKLA--TQLRGP 503
R NK ESL +NV +K Y ++L+LFP+ K KG A E+ R LA Q
Sbjct: 100 RTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKK 159
Query: 504 LMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAK 614
+MPV Q K R +TE + + Y LR AR AK
Sbjct: 160 VMPVVQEFVKEPPREVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +2
Query: 209 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
LRPIVRCPT++Y+ R GRGFT E AGL+ AR +GIAV R
Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLR 97
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 53.6 bits (123), Expect = 4e-06
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 83 HFHKDWQRFVKTWFNQPARRYRRK 154
HFHKDWQR+VKTWFNQP R+ RR+
Sbjct: 16 HFHKDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRR 151
L HFHKDWQR V TWFNQPAR+ RR
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 41.1 bits (92), Expect = 0.022
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -2
Query: 324 VRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 187
VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 398 VRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.051
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2
Query: 209 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 304
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 215 PIVRCPTVRYHTKVRAGRGFTLREIR 292
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 35.9 bits (79), Expect = 0.83
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 212 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI V R
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDER 54
>UniRef50_UPI0000ECD41A Cluster: interphotoreceptor matrix
proteoglycan 2; n=3; Gallus gallus|Rep:
interphotoreceptor matrix proteoglycan 2 - Gallus gallus
Length = 1253
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 315 LPERLELLXIPARRNKSVESLQINVQXIKEYRARLILFPKGKKVLKGEANEQ 470
+PE L + + K+VE+ Q+N ++ R R ILFP G K+ E+ EQ
Sbjct: 50 IPEEKTGLSLLTEKKKNVEAEQVNRHLLRR-RKRSILFPSGVKICPDESVEQ 100
>UniRef50_Q5ANA6 Cluster: Cytoplasmic dynein heavy chain; n=1; Candida
albicans|Rep: Cytoplasmic dynein heavy chain - Candida
albicans (Yeast)
Length = 4161
Score = 34.3 bits (75), Expect = 2.5
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 44 SKWARGII*YLTGHFHKDWQRFVKTWFNQPARRY 145
++W+RGI+ L H +KD F++ W+++ R +
Sbjct: 2672 TRWSRGILEALKSHMYKDLSAFLRLWYHEGLRLF 2705
>UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495497 protein -
Strongylocentrotus purpuratus
Length = 802
Score = 33.5 bits (73), Expect = 4.4
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -1
Query: 301 SCGPNFTKSESSTGAYFSMVPNSWASHYRT*RPS-CRTWSYGLSFLYXILLSAVSSSWLV 125
SC P+ T S ST + P +H+ T P C WS+ SF Y A L
Sbjct: 367 SCPPSSTSS--STSSKQETPPCPVDNHFETGPPEKCHKWSFIFSFTYLAFFRAAGYFGLE 424
Query: 124 KP-SFNKSLPILVEM 83
KP SF+ + +L+ +
Sbjct: 425 KPTSFSNVVQLLLTL 439
>UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like;
n=10; Magnoliophyta|Rep: Protein serine/threonine
kinase-like - Arabidopsis thaliana (Mouse-ear cress)
Length = 410
Score = 33.5 bits (73), Expect = 4.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 432 KGKKVLKGEANEQXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQY 587
KGK++L+ A E + T P P+P+S+ TE E+N + + Y
Sbjct: 25 KGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTEREQNLRVFSY 76
>UniRef50_A5K3G5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 795
Score = 33.1 bits (72), Expect = 5.9
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 312 YLPERLELLXIPARRNKSVESLQINVQXIKEYRARLILFPKGKKVLKGEANEQXRKLATQ 491
Y P+ L++ P+ + +V Q++V K YR R + KK L E + Q Q
Sbjct: 696 YAPKNLKIYRRPSMISDAVRHTQVDVFKCKSYRGRTAKVLRKKKKLIEELDRQNPGRRQQ 755
Query: 492 LRGPLM---PVQQPAPKSVARPI 551
++G + P P +V+ P+
Sbjct: 756 MKGLTLQGEPSAVPGGAAVSTPV 778
>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
Sophophora|Rep: CG17608-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 271
Score = 32.7 bits (71), Expect = 7.7
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 348 ARRNKSVESLQINVQXIKEYRARLILFPKGKKVLKGEA---NEQXRKLATQLRGPLMPV 515
+R+ S+ SLQ + I+E +L+LFP+G + K + +A Q + P+ PV
Sbjct: 144 SRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQPV 202
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 32.7 bits (71), Expect = 7.7
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VR GRGF+L E+ AGL+ AR +G+ V R
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTR 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,865,806
Number of Sequences: 1657284
Number of extensions: 11618501
Number of successful extensions: 28372
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 27561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28342
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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