Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_A14
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   3.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   3.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -2

Query: 186 ATALAFFIXFCFLRYRRAGWLNQVLTNLCQSLWKCPVRYHIIPLA--HFDV 40
           +  + F +      +RR   LN  LT +    W     YH++ ++  HFD+
Sbjct: 166 SATVCFMMLLMLEIWRRFTILNNYLTIVLGETWTSLSVYHLVEISEIHFDL 216


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -2

Query: 186 ATALAFFIXFCFLRYRRAGWLNQVLTNLCQSLWKCPVRYHIIPLA--HFDV 40
           +  + F +      +RR   LN  LT +    W     YH++ ++  HFD+
Sbjct: 162 SATVCFMMLLMLEIWRRFTILNNYLTIVLGETWTSLSVYHLVEISEIHFDL 212


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 77   TGHFHKDWQRFVKTWFN 127
            T H H DW     TW++
Sbjct: 1028 TEHMHPDWTTKPSTWWS 1044


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 543 RPITEXEKNFKAYQYLRGARSIAKLVGIRAN 635
           + +TE EK F   +YL  AR I     ++ N
Sbjct: 263 KQLTELEKEFHFNKYLTRARRIEIASALQLN 293


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 543 RPITEXEKNFKAYQYLRGARSIAKLVGIRAN 635
           + +TE EK F   +YL  AR I     ++ N
Sbjct: 52  KQLTELEKEFHFNKYLTRARRIEIASALQLN 82


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 543 RPITEXEKNFKAYQYLRGARSIAKLVGIRAN 635
           + +TE EK F   +YL  AR I     ++ N
Sbjct: 52  KQLTELEKEFHFNKYLTRARRIEIASALQLN 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,204
Number of Sequences: 336
Number of extensions: 2792
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)