Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A14
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 120 6e-27
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 120 6e-27
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 120 6e-27
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 120 6e-27
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 120 6e-27
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 116 5e-26
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 63 7e-10
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 120 bits (288), Expect = 6e-27
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 116 bits (280), Expect = 5e-26
Identities = 54/92 (58%), Positives = 63/92 (68%)
Frame = +2
Query: 74 LTGHFHKDWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTK 253
L HFHKDWQR V TWFNQPAR+ RR++ +RPIVRC TVRYHTK
Sbjct: 10 LKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVRYHTK 69
Query: 254 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 349
VRAGRGF+L E+R AG++ ARTIGI+V PR
Sbjct: 70 VRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 109 bits (261), Expect = 1e-23
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 PARRNKSVESLQINVQXIKEYRARLILFP-KGKKVLKGEANEQXRKLATQLRGPLMPVQQ 521
P RRNKS ESLQ NVQ +KEYR++LILFP K KG+++ + KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 522 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 196
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 63.3 bits (147), Expect = 7e-10
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = +3
Query: 477 KLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRA 632
KLATQL GP+MPV+ K AR ITE EKNFKA+ LR AR+ A+L GIRA
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,048,998
Number of Sequences: 237096
Number of extensions: 1789066
Number of successful extensions: 3627
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3597
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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