Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A10
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 32 0.45
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 31 0.79
09_04_0500 - 18120287-18122233 29 2.4
10_08_0486 - 18239351-18239592,18240893-18240984,18241279-182413... 29 4.2
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790... 29 4.2
07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 29 4.2
03_06_0775 - 36174098-36174204,36174540-36174594,36174690-361747... 28 5.6
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 28 7.4
02_03_0102 - 15238808-15239437,15241609-15243264 28 7.4
02_02_0403 - 9866122-9867231 28 7.4
01_07_0366 + 43088835-43089099,43089311-43089876 28 7.4
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 27 9.7
09_04_0204 - 15565684-15566223,15567272-15567678,15568143-155684... 27 9.7
01_06_0356 + 28662956-28664043,28664255-28665139,28665227-286658... 27 9.7
>03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 441 QTEQRLIQKELQYQKLRWNHGTKRGLAE*WRGDSSQSSSQKC*ETSENHSGD 596
+ E+R +++ L+YQ+ K+ LAE R S S C T N +GD
Sbjct: 974 EAEERKLEETLEYQRWIEEEAKKKHLAEQHRRTSPGSDGSACLRTDVNLNGD 1025
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 450 QRLIQKELQYQKLRWNHGTKRGLAE*WRGDSSQSSSQKC*ETSE 581
QRL +KE++ +KL H K+ AE G SS SS ET E
Sbjct: 659 QRLHEKEIEGRKLLQAHLEKKAAAESATGSSSSLSSNSLEETPE 702
>09_04_0500 - 18120287-18122233
Length = 648
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 325 YGYMYAKHLSFLNNIYKSTSQSGSDAEQDDNWQSDDD 435
+G M A H + L+ + + + G + E DD + DDD
Sbjct: 483 FGLMNASHRNPLSKLDECDEEDGEEEEDDDGDEEDDD 519
>10_08_0486 -
18239351-18239592,18240893-18240984,18241279-18241364,
18241442-18241643,18241743-18241960,18242524-18242640
Length = 318
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +1
Query: 337 YAKHLSFLNNIYKSTSQSGSDAEQDDN----WQSDDDSAKLS-NVSFRKSFNIKNCDGIT 501
Y +LS + +Y + +Q+ S + +DN W D+D+ K+S + S ++ NCD I+
Sbjct: 93 YVPYLSGIQ-LYTNKAQTASRSFGEDNGMDYWSDDEDNEKMSRSWSSTSEDSLFNCDAIS 151
>07_03_0358 - 17177253-17177369,17177635-17177931,17178961-17179032,
17179117-17179383,17179752-17179910,17180194-17180295,
17180696-17180767,17181105-17181200,17181710-17181871,
17181941-17182021,17182837-17183094,17183173-17183275,
17183412-17183542,17184827-17184919,17184999-17185099,
17186271-17186355,17186487-17186701,17186779-17186842,
17187128-17187214,17188922-17189022,17190206-17190397,
17190533-17190599,17191211-17191351
Length = 1020
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 523 SDGEEIPLRAPVRSVRKRRKIIPEIEYVEPLAEPTCSSTGED 648
SD EE + P ++ ++R+ E E EP+ P S GE+
Sbjct: 975 SDAEEDDMGHPQSAIERKRRAWSESEDDEPVQRPVQPSAGEN 1016
>07_01_1046 -
9138000-9138293,9139550-9139714,9139862-9140010,
9140363-9140510,9140659-9140727,9140827-9141087,
9141498-9141692,9142932-9143048,9143701-9144477
Length = 724
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +1
Query: 283 RNIRDSYVRSLRKGYGYMYAKHLSFLNNIYKSTSQSGSDAE 405
++I ++YV+++R Y+Y ++ F+ + Y +S + AE
Sbjct: 485 KSIHNAYVKAIRSAQHYIYIENQYFIGSSYYWSSNRSAGAE 525
>03_06_0775 -
36174098-36174204,36174540-36174594,36174690-36174741,
36174947-36175028,36175110-36175204,36175339-36175727
Length = 259
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 609 LXVLNLR-NDFPTFPNTSDWSSERNLLAITLPVHASFRDSI 490
L +LN+ N F TFPN ++ S R LP+ +F D +
Sbjct: 206 LEILNIATNLFDTFPNIAEGSQTRKGTVWGLPMDQNFSDDV 246
>11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 609 LXVLNLRNDFPTFPNTSDWSSERNLLAITLPV 514
L +L R + PT P SDW + + A T+ V
Sbjct: 1201 LDILLKREEVPTLPKNSDWDRKSEMEAWTIRV 1232
>02_03_0102 - 15238808-15239437,15241609-15243264
Length = 761
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 11 RPSLVLCVTRQYRMLTLFIVPNDFVLFRHRG 103
RP V C+TR ++ + L + ND VL RG
Sbjct: 268 RPDFVGCLTRLFKDIVLAVEENDAVLRELRG 298
>02_02_0403 - 9866122-9867231
Length = 369
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = -2
Query: 555 WSSERNLLAITLPVHASFRDS--IAVFDIEALSE*DV---AQFGRVVVALPI 415
W++ER L + + HA+F D+ +A D A E V ++ GR ALP+
Sbjct: 16 WAAERLLGRLIILAHAAFLDAGFVAAADAAADQENSVRLPSEVGRTAAALPL 67
>01_07_0366 + 43088835-43089099,43089311-43089876
Length = 276
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +1
Query: 235 PRAEKLDV--YKKLNGKWRNIRDSYVRSLRKGYGYMYAKHLSFLNNIYKSTSQSGSDAEQ 408
P E++ V + KL +W I S + HL L K Q SD
Sbjct: 116 PEEERMVVQLHAKLGNRWSRIAKSIPGRTDNEIKNYWRTHLRKLK--LKQQKQQQSDDHH 173
Query: 409 DDNWQSDDDSAKLSNVSFRKSFNIK 483
+DN DD ++ S+ S + N++
Sbjct: 174 NDNDDDDDRNSSSSSSSSNSNSNLQ 198
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 441 QTEQRLIQKELQYQKLRWNHG-TKRGLAE*WRGDSSQSSS 557
+ EQR I+ E +K RWN+ T L E ++ SSQ SS
Sbjct: 636 EQEQRAIKAEESLRKARWNNATTAERLQEEFKMLSSQVSS 675
>09_04_0204 -
15565684-15566223,15567272-15567678,15568143-15568446,
15568735-15570065,15570769-15570846,15570943-15571027
Length = 914
Score = 27.5 bits (58), Expect = 9.7
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 253 DVYKKL-NGKWRNIRD-SYVRSLRKGYGYMYAKHLSFLNNIYKSTSQSGSDAEQDDNWQS 426
DV++ L NG++ + SYV L KG G+ K ++ N S +DA + Q+
Sbjct: 645 DVHELLKNGEYVGYHNGSYVGDLLKGLGFDRTKIRAYDN------SDDFADALTKGS-QN 697
Query: 427 DDDSAKLSNVSFRKSFNIKNCDGITERSVDWQSD--GEEIPLRAPV 558
+A + V + K F K+C G T ++S+ G P R+P+
Sbjct: 698 GGIAAVVHEVPYIKIFLAKHCKGYTMVGPIYKSEGFGFAFPKRSPL 743
>01_06_0356 +
28662956-28664043,28664255-28665139,28665227-28665840,
28665929-28666338
Length = 998
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -3
Query: 317 LRLRTYESRMLRHFPLSFLYTSNFSALGHIGEVVDEYPGYLCPCVLFAMFIFKIFI 150
L L E+ + P F N S L IG + + G L PCV + +IF+
Sbjct: 339 LALDLSENNLEGEIPPEFGQLRNLSNLNTIGMSYNRFEGSLLPCVGNLSTLIEIFV 394
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,312,502
Number of Sequences: 37544
Number of extensions: 359388
Number of successful extensions: 1302
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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