Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A10
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 34 0.100
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 34 0.100
U97193-1|AAB52438.1| 220|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF040643-12|AAB94964.2| 658|Caenorhabditis elegans Hypothetical... 33 0.17
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 32 0.40
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 32 0.40
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 31 0.70
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 31 0.70
AC024208-1|AAF36054.2| 383|Caenorhabditis elegans Hypothetical ... 31 0.70
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 29 2.1
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 28 6.6
Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81049-4|CAJ76935.1| 496|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80448-2|AAB37816.1| 321|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical
protein C25G4.5 protein.
Length = 1263
Score = 33.9 bits (74), Expect = 0.100
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 349 LSFLNNIYKSTSQSGSDAEQDDNWQSDDDS-AKLSNVSFRKSFNIKNCDGITERSV 513
L FLNN+ + + + DA+ D NW+ D+++ A + F+ N K+ D +R +
Sbjct: 163 LDFLNNMDDALTTTELDADNDKNWKEDEENIAGEPRIDFKA--NSKDVDAFLQRDI 216
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 33.9 bits (74), Expect = 0.100
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 349 LSFLNNIYKSTSQSGSDAEQDDNWQSDDDS-AKLSNVSFRKSFNIKNCDGITERSV 513
L FLNN+ + + + DA+ D NW+ D+++ A + F+ N K+ D +R +
Sbjct: 163 LDFLNNMDDALTTTELDADNDKNWKEDEENIAGEPRIDFKA--NSKDVDAFLQRDI 216
>U97193-1|AAB52438.1| 220|Caenorhabditis elegans Hypothetical
protein C06A5.4 protein.
Length = 220
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 DIEAFISEVSKHPQIWDLNNEDFKYKHRK-QNAWAEVSRIFINDFADMTQGRKVG 254
++E F+ VS P +W + DF K K AWAE+ R N F M +GR G
Sbjct: 89 EMEQFLRLVSDKPFLWHTKDSDFHRKKEKGMPAWAEIERT-CNTF--MGKGRTPG 140
>AF040643-12|AAB94964.2| 658|Caenorhabditis elegans Hypothetical
protein F14D2.9 protein.
Length = 658
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 93 DIEAFISEVSKHPQIWDLNNEDFKYKHRK-QNAWAEVSRIFINDFADMTQGRKVGCI*KA 269
++E F+ VS P +W DF K K AWAE+ R N F M +GR KA
Sbjct: 232 EMEQFLRLVSDEPFLWHTKVSDFHRKKEKGMPAWAEIERT-CNTF--MGKGRTPDRN-KA 287
Query: 270 *REMAQHTRFVRTQSQERL 326
+MA +R + ++ +++L
Sbjct: 288 DFQMAPSSREITSRKKKKL 306
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 338 MRNICPS*TTYTRAPANLAATLSKTTIGRATTTRPN*ATSHSERASISKTAMESRNEAWT 517
M N S T++R P N ATL+ +G TT + + SE +I E++ E
Sbjct: 2130 MSNTISSSETFSRIPENKKATLT-NLVGIITTQDLSTLGASSENQTIEMDYTEAKEELEA 2188
Query: 518 GRVMARRFLSELQSEV 565
+ + + LS L++E+
Sbjct: 2189 SKKLVDKNLSVLKTEI 2204
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 338 MRNICPS*TTYTRAPANLAATLSKTTIGRATTTRPN*ATSHSERASISKTAMESRNEAWT 517
M N S T++R P N ATL+ +G TT + + SE +I E++ E
Sbjct: 2130 MSNTISSSETFSRIPENKKATLT-NLVGIITTQDLSTLGASSENQTIEMDYTEAKEELEA 2188
Query: 518 GRVMARRFLSELQSEV 565
+ + + LS L++E+
Sbjct: 2189 SKKLVDKNLSVLKTEI 2204
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 370 YKSTSQSGSDAEQDDNWQSDDDSAKLSNVSFRKSFNIKNCDGITERSVDWQSDGEE---- 537
Y S S DA+ DD+ + DD+ A++ + +S D I +D++S +E
Sbjct: 762 YNSKSSDSEDADLDDDDEDDDEEAEIQIIDNGESQLKLAMDRIDRLDIDFESRFQEDTAR 821
Query: 538 --IPLRAPVRSVR 570
+ L AP++S +
Sbjct: 822 VILQLSAPLKSCK 834
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with ran
(nuclear import/export) function protein 2, isoform a
protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 370 YKSTSQSGSDAEQDDNWQSDDDSAKLSNVSFRKSFNIKNCDGITERSVDWQSDGEE---- 537
Y S S DA+ DD+ + DD+ A++ + +S D I +D++S +E
Sbjct: 799 YNSKSSDSEDADLDDDDEDDDEEAEIQIIDNGESQLKLAMDRIDRLDIDFESRFQEDTAR 858
Query: 538 --IPLRAPVRSVR 570
+ L AP++S +
Sbjct: 859 VILQLSAPLKSCK 871
>AC024208-1|AAF36054.2| 383|Caenorhabditis elegans Hypothetical
protein Y75B7B.1 protein.
Length = 383
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 415 NWQSDDDSAKLSNVSFRKSFNIKNCDGITERSVDWQSDGEEIPLRAPVRSV 567
N D KL++V +N+ N DG+ +V+ + + E++ AP+ SV
Sbjct: 201 NMDDYDQFPKLADVLMMSPYNVFNADGVPFWAVNPEPNDEDLKTTAPIISV 251
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 319 KGYGYMYAKHLSFLNNIYK--STSQSGSDAEQDDNWQSDDDSAKLSN 453
K Y Y Y K + + ++ S+S S SD + DD ++ +D +++ SN
Sbjct: 2 KNYFYCYPKSKIQMISSFEPPSSSSSSSDEDSDDEYREEDGNSERSN 48
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +1
Query: 262 KKLNGKWRNIRDSYVRSLRK-GYG-----YMYAKHLSFLN 363
+ L+ +W+ +RD Y + RK YG + Y KHL FL+
Sbjct: 52 RMLSARWKQLRDKYGKEKRKQKYGNEKSSWQYFKHLHFLD 91
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 27.9 bits (59), Expect = 6.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 373 CICCSGRTDVSHTC 332
C+CC+G DV H C
Sbjct: 125 CLCCAGSKDVKHFC 138
>Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical
protein T23D5.3 protein.
Length = 237
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 347 ICPS*TTYTRAPANLAATLSKTTIGRATTTRPN*ATS 457
+ P TT R+P ++ S TT G ATT P+ AT+
Sbjct: 103 VAPGATT-VRSPGSVTTAGSATTAGSATTGSPSAATT 138
>Z81049-4|CAJ76935.1| 496|Caenorhabditis elegans Hypothetical
protein C48D1.1b protein.
Length = 496
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 223 KSLMNIRDTSAHAFCLRCLYLKSSLFRSQICGCLLTSLMKASMSKQY 83
KS+ S L+CL + L+ +Q+C +T L++A MS Y
Sbjct: 218 KSMQTFDSISVTQNGLKCLIIFGMLYSNQLCSNGVTLLVEALMSFVY 264
>Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical
protein C48D1.1a protein.
Length = 631
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 223 KSLMNIRDTSAHAFCLRCLYLKSSLFRSQICGCLLTSLMKASMSKQY 83
KS+ S L+CL + L+ +Q+C +T L++A MS Y
Sbjct: 353 KSMQTFDSISVTQNGLKCLIIFGMLYSNQLCSNGVTLLVEALMSFVY 399
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +1
Query: 391 GSDAEQDDNWQSDDDSAKLSNVSFRKSFNIKNCDGITERSVDWQSDGEEIPLRAPVRSVR 570
G+DAE+DD DDD + + + +++ V+ ++DG++ P + + R
Sbjct: 280 GNDAEKDDGDDDDDDDDGNDDDEEDGKNKKTSVEAKSDKVVEEKNDGDDEPHVSHREAQR 339
Query: 571 KRRKIIPE 594
RR+ + E
Sbjct: 340 LRRQHLRE 347
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +1
Query: 391 GSDAEQDDNWQSDDDSAKLSNVSFRKSFNIKNCDGITERSVDWQSDGEEIPLRAPVRSVR 570
G+DAE+DD DDD + + + +++ V+ ++DG++ P + + R
Sbjct: 280 GNDAEKDDGDDDDDDDDGNDDDEEDGKNKKTSVEAKSDKVVEEKNDGDDEPHVSHREAQR 339
Query: 571 KRRKIIPE 594
RR+ + E
Sbjct: 340 LRRQHLRE 347
>U80448-2|AAB37816.1| 321|Caenorhabditis elegans Hypothetical
protein F59A3.4 protein.
Length = 321
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -2
Query: 534 LAITLPVHASFRDSIAVF---DIEALSE*DVAQFGRVVVALPIVVLLSVAARLAGALVYV 364
LA++LP+ A + F + + E A FG V VL A AGA++YV
Sbjct: 225 LAVSLPLAAFGHSKLKAFWYGQLSGMVEPIAALFGAAAVIFMEPVLPYALAFAAGAMIYV 284
Query: 363 V 361
V
Sbjct: 285 V 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,746,946
Number of Sequences: 27780
Number of extensions: 314606
Number of successful extensions: 1261
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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