Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A03
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 184 6e-47
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 184 6e-47
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 184 6e-47
AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 30 1.2
Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical pr... 29 3.8
U64836-9|AAG24062.2| 93|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 184 bits (447), Expect = 6e-47
Identities = 87/133 (65%), Positives = 100/133 (75%), Gaps = 2/133 (1%)
Frame = +1
Query: 253 LPRLEELFAKFNAPA--PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKS 426
L LE+L+ KF+ P P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKS
Sbjct: 46 LTPLEQLYEKFHGPQAKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKS 105
Query: 427 IEGSYVYKGGKISKVPVDQKEALASDLMGMFXKRRFRNFLIYVQXFQXEDAXTWXDFDPS 606
IE S+V KGGKI KVP D+ EALA+ LMGMF KRRF+ FL++VQ F TW DP
Sbjct: 106 IEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPH 165
Query: 607 TANMQSLYDKFGL 645
+ MQ +Y+KFGL
Sbjct: 166 NSTMQQVYEKFGL 178
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = +3
Query: 117 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPL 263
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPL
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPL 49
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 184 bits (447), Expect = 6e-47
Identities = 87/133 (65%), Positives = 100/133 (75%), Gaps = 2/133 (1%)
Frame = +1
Query: 253 LPRLEELFAKFNAPA--PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKS 426
L LE+L+ KF+ P P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKS
Sbjct: 46 LTPLEQLYEKFHGPQAKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKS 105
Query: 427 IEGSYVYKGGKISKVPVDQKEALASDLMGMFXKRRFRNFLIYVQXFQXEDAXTWXDFDPS 606
IE S+V KGGKI KVP D+ EALA+ LMGMF KRRF+ FL++VQ F TW DP
Sbjct: 106 IEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPH 165
Query: 607 TANMQSLYDKFGL 645
+ MQ +Y+KFGL
Sbjct: 166 NSTMQQVYEKFGL 178
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = +3
Query: 117 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPL 263
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPL
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPL 49
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 184 bits (447), Expect = 6e-47
Identities = 87/133 (65%), Positives = 100/133 (75%), Gaps = 2/133 (1%)
Frame = +1
Query: 253 LPRLEELFAKFNAPA--PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKS 426
L LE+L+ KF+ P P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKS
Sbjct: 46 LTPLEQLYEKFHGPQAKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKS 105
Query: 427 IEGSYVYKGGKISKVPVDQKEALASDLMGMFXKRRFRNFLIYVQXFQXEDAXTWXDFDPS 606
IE S+V KGGKI KVP D+ EALA+ LMGMF KRRF+ FL++VQ F TW DP
Sbjct: 106 IEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPH 165
Query: 607 TANMQSLYDKFGL 645
+ MQ +Y+KFGL
Sbjct: 166 NSTMQQVYEKFGL 178
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = +3
Query: 117 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPL 263
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPL
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPL 49
>AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical
protein Y67D2.1b protein.
Length = 353
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3
Query: 117 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 257
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 322 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 486
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 487 EALASDLMGMFXKRRFRNFLIYVQXFQXED 576
E S+ + + KR F+ + + +D
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKD 211
>AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical
protein Y67D2.1a protein.
Length = 510
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3
Query: 117 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 257
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 322 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 486
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 487 EALASDLMGMFXKRRFRNFLIYVQXFQXED 576
E S+ + + KR F+ + + +D
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKD 211
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 123 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 251
+ YD I++G G + L+ +GKKV ++R GG + +
Sbjct: 13 QSYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55
>Z35600-2|CAA84663.1| 394|Caenorhabditis elegans Hypothetical
protein F37A8.2 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 199 RRFCTSIAISTTVVNLRQLPRLEELFAKFNAPAPDETYGRGRDWNVDL 342
R + T+ I + + +L + P+ EL +AP TY W+V++
Sbjct: 73 RNYSTNPLIPSYICDLCESPKTSELRVAHDAPTFQTTYSYSISWDVEM 120
>U64836-9|AAG24062.2| 93|Caenorhabditis elegans Hypothetical
protein F10G2.9 protein.
Length = 93
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 110 SVKDQLDLTNYWLKKCQNVGTENGKM 33
S +DQL LT + L KC+N+ T N M
Sbjct: 49 STQDQLILTRHVLLKCKNLHTSNYTM 74
>Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical
protein F56H6.7 protein.
Length = 797
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 471 YFGDFSTFVNITSFDGLKLQVPGDARVNKQFD*QSISHQKLRNQVNVPVS 322
YFGD + N T + L Q P ++ KQ + QK +N V + V+
Sbjct: 456 YFGDIVDWCNETGYSNLSNQFPSATQLAKQHG-DTYVFQKDQNSVLIAVN 504
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,666,355
Number of Sequences: 27780
Number of extensions: 304902
Number of successful extensions: 774
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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