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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_A02
         (654 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...   279   2e-76
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...   279   3e-76
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...   279   3e-76
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...   154   1e-38
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...   151   6e-38
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    98   1e-21
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    50   4e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    44   2e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    39   5e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    35   0.012
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    33   0.036
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...    31   0.11 
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...    31   0.11 
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    30   0.25 
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p...    30   0.34 
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||...    29   0.44 
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    29   0.44 
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom...    27   1.8  
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    27   2.4  

>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score =  279 bits (685), Expect = 2e-76
 Identities = 132/168 (78%), Positives = 146/168 (86%)
 Frame = +3

Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
           YKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT
Sbjct: 29  YKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVT 88

Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
           +IDAPGHRDFIKNMITGTSQADCAVLI+  GTGEF  GIS +GQTREHALLA+TLGVKQL
Sbjct: 89  VIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQL 148

Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653
           IV VNKMD+T   +S+  F EI  E S++IKK+G+NP  V FVP+SG+
Sbjct: 149 IVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194



 Score = 59.3 bits (137), Expect = 5e-10
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +2

Query: 65  MGKEKTHINIVVIGHVDSGKSTTTGHLI 148
           MGKEK HIN+VVIGHVDSGKSTTTGHLI
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLI 28


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score =  279 bits (684), Expect = 3e-76
 Identities = 131/168 (77%), Positives = 146/168 (86%)
 Frame = +3

Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
           YKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT
Sbjct: 29  YKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVT 88

Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
           +IDAPGHRDFIKNMITGTSQADCA+LI+  GTGEF  GIS +GQTREHALLA+TLGVKQL
Sbjct: 89  VIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQL 148

Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653
           IV VNKMD+T   +S+  F EI  E S++IKK+G+NP  V FVP+SG+
Sbjct: 149 IVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194



 Score = 59.3 bits (137), Expect = 5e-10
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +2

Query: 65  MGKEKTHINIVVIGHVDSGKSTTTGHLI 148
           MGKEK HIN+VVIGHVDSGKSTTTGHLI
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLI 28


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score =  279 bits (684), Expect = 3e-76
 Identities = 131/168 (77%), Positives = 146/168 (86%)
 Frame = +3

Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
           YKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT
Sbjct: 29  YKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVT 88

Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
           +IDAPGHRDFIKNMITGTSQADCA+LI+  GTGEF  GIS +GQTREHALLA+TLGVKQL
Sbjct: 89  VIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQL 148

Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653
           IV VNKMD+T   +S+  F EI  E S++IKK+G+NP  V FVP+SG+
Sbjct: 149 IVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194



 Score = 59.3 bits (137), Expect = 5e-10
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +2

Query: 65  MGKEKTHINIVVIGHVDSGKSTTTGHLI 148
           MGKEK HIN+VVIGHVDSGKSTTTGHLI
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLI 28


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score =  154 bits (373), Expect = 1e-38
 Identities = 80/167 (47%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
 Frame = +3

Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
           ++ G I+ R++ K   EA   GKGSF YAW+LD  + ER RG+T+D+A   FE+ K    
Sbjct: 199 FELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYE 258

Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
           I DAPGHRDFI  MI G S AD AVL+V +    F  G   NGQTREHA L   LG+ ++
Sbjct: 259 IGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEI 318

Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSY-IKKIGYNPXAVAFVPIS 647
           +V VNK+D     +SE  F EI   VS + IK +G+    V FVPIS
Sbjct: 319 VVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPIS 363



 Score = 33.5 bits (73), Expect = 0.027
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 77  KTHINIVVIGHVDSGKSTTTGHLILQM 157
           K  +++VV GHVDSGKST  G ++ ++
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFEL 201


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score =  151 bits (367), Expect = 6e-38
 Identities = 71/167 (42%), Positives = 106/167 (63%), Gaps = 2/167 (1%)
 Frame = +3

Query: 159 GGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVTIID 338
           G +DKRT+ K E+EA E GK S+  +W LD    ERE+G T+++    FET     +++D
Sbjct: 263 GMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLD 322

Query: 339 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVR 518
           APGH+ ++ NMI G SQAD  VL+++A  GEF  G    GQTREHA+LA T G+  L+V 
Sbjct: 323 APGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVV 382

Query: 519 VNKMDSTEPPYSEPXFXEIXXEVSSYIKKI-GYNPXA-VAFVPISGW 653
           +NKMD     +SE  + E   ++S +++++ GYN    V ++P+S +
Sbjct: 383 INKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAY 429



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = +2

Query: 77  KTHINIVVIGHVDSGKSTTTGHLI 148
           K H+NIV IGHVD+GKST  G+++
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNIL 259


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 97.9 bits (233), Expect = 1e-21
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 207 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTS 386
           ++G+ SF     +DK   E+ RGITI  A  ++ET   +   +D PGH D+IKNMITG +
Sbjct: 79  DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138

Query: 387 QADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMDSTEPPYSEPXF 566
             D A+++V+A  G+         QTREH LLA  +GVKQ++V +NK+D  EP   E   
Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVE 191

Query: 567 XEIXXEVSSY 596
            E+   +S Y
Sbjct: 192 MEMRELLSEY 201



 Score = 33.5 bits (73), Expect = 0.027
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +2

Query: 71  KEKTHINIVVIGHVDSGKSTTT 136
           ++K H+NI  IGHVD GK+T T
Sbjct: 49  RKKPHVNIGTIGHVDHGKTTLT 70


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 49.6 bits (113), Expect = 4e-07
 Identities = 35/98 (35%), Positives = 47/98 (47%)
 Frame = +3

Query: 240 VLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 419
           V+D L AER+RGITI+ A   F      + +ID PGH DF   +    +  D AV I+  
Sbjct: 67  VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126

Query: 420 GTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD 533
             G          QT+     A   G+ ++I  VNKMD
Sbjct: 127 SAG-------VEAQTKVVWKQATKRGIPKVIF-VNKMD 156



 Score = 25.4 bits (53), Expect = 7.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +2

Query: 89  NIVVIGHVDSGKSTTTGHLI 148
           N+ +I H+D+GK+T T  ++
Sbjct: 30  NVGIIAHIDAGKTTLTEKML 49


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
 Frame = +3

Query: 243 LDKLKAERERGITIDIA----LWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 410
           LDKL+ ER RGIT+       ++ +    Y + +ID PGH DF   ++   +  +  +L+
Sbjct: 95  LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154

Query: 411 VAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD 533
           V A  G          QT  +  +AF+  +  +I  +NK+D
Sbjct: 155 VDASQG-------IQAQTLSNFYMAFSQNL-VIIPVLNKVD 187


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 39.1 bits (87), Expect = 5e-04
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +3

Query: 321 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGV 500
           +V+ +D PGH   +  M+ G +  D A+L++A              QT EH      + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162

Query: 501 KQLIVRVNKMDSTEPPYSEPXFXEI 575
           K +I+  NK+D      +E  +  I
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSI 187



 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 59  PKMGKEKTHINIVVIGHVDSGKST 130
           P +   +  INI  IGHV  GKST
Sbjct: 15  PAIISRQATINIGTIGHVAHGKST 38


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 34.7 bits (76), Expect = 0.012
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +3

Query: 213 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETXKYYVTIIDAPGHRDFIKNMITGTS 386
           GK +   A+    + +    GIT  I  +   F+    ++T +D PGH  F      G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242

Query: 387 QADCAVLIVAAGTG 428
            AD  VL+VA   G
Sbjct: 243 IADIVVLVVAGDDG 256


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 33.1 bits (72), Expect = 0.036
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREH 473
           Y + IID PGH DF   +       D AVL++ A +G     I+ + Q R +
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196


>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score = 31.5 bits (68), Expect = 0.11
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +2

Query: 65  MGKEKTHINIVVIGHVDSGKSTTTGHLI 148
           MGK     N+ VI HVD GKST T  L+
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLV 40



 Score = 27.9 bits (59), Expect = 1.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 413
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score = 31.5 bits (68), Expect = 0.11
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +2

Query: 65  MGKEKTHINIVVIGHVDSGKSTTTGHLI 148
           MGK     N+ VI HVD GKST T  L+
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLV 40



 Score = 27.9 bits (59), Expect = 1.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 413
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 30.3 bits (65), Expect = 0.25
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 428
           Y + +ID+PGH DF   + + +   D A ++V A  G
Sbjct: 94  YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130


>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 704

 Score = 29.9 bits (64), Expect = 0.34
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 283 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMVRLSIPPH 155
           I IP+   A S+ N++ + +D LP  +   S    V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213


>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 380

 Score = 29.5 bits (63), Expect = 0.44
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 246 DKLKAER-ERGITIDIALWKFETXKYYV--TIIDAPGHRDFIKN 368
           +K++A+  E+ + I+I   + E   +++  T+ID PG  DFI N
Sbjct: 60  EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 29.5 bits (63), Expect = 0.44
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIV 413
           IID PGH  F      GTS  + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580


>SPCC63.03 |||DNAJ domain protein, DNAJC11
           family|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 642

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 307 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMV 176
           S F   IS+ +P     FSL+ ++   K  LPI W S  + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +3

Query: 261 ERERGITID-----IALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 413
           ERER ++I      +A+   +   +    ID PGH DF+  +    + +D  VL+V
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,366,755
Number of Sequences: 5004
Number of extensions: 41356
Number of successful extensions: 143
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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