BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_A02 (654 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 279 2e-76 SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 279 3e-76 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 279 3e-76 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 154 1e-38 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 151 6e-38 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 98 1e-21 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 4e-07 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 2e-05 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 39 5e-04 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 0.012 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.036 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 31 0.11 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 31 0.11 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.25 SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 30 0.34 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.44 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.44 SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 1.8 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.4 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 279 bits (685), Expect = 2e-76 Identities = 132/168 (78%), Positives = 146/168 (86%) Frame = +3 Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329 YKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT Sbjct: 29 YKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVT 88 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509 +IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEF GIS +GQTREHALLA+TLGVKQL Sbjct: 89 VIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQL 148 Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653 IV VNKMD+T +S+ F EI E S++IKK+G+NP V FVP+SG+ Sbjct: 149 IVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194 Score = 59.3 bits (137), Expect = 5e-10 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLI 148 MGKEK HIN+VVIGHVDSGKSTTTGHLI Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLI 28 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 279 bits (684), Expect = 3e-76 Identities = 131/168 (77%), Positives = 146/168 (86%) Frame = +3 Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329 YKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT Sbjct: 29 YKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVT 88 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509 +IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEF GIS +GQTREHALLA+TLGVKQL Sbjct: 89 VIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQL 148 Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653 IV VNKMD+T +S+ F EI E S++IKK+G+NP V FVP+SG+ Sbjct: 149 IVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194 Score = 59.3 bits (137), Expect = 5e-10 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLI 148 MGKEK HIN+VVIGHVDSGKSTTTGHLI Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLI 28 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 279 bits (684), Expect = 3e-76 Identities = 131/168 (77%), Positives = 146/168 (86%) Frame = +3 Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329 YKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT Sbjct: 29 YKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVT 88 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509 +IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEF GIS +GQTREHALLA+TLGVKQL Sbjct: 89 VIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQL 148 Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653 IV VNKMD+T +S+ F EI E S++IKK+G+NP V FVP+SG+ Sbjct: 149 IVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGF 194 Score = 59.3 bits (137), Expect = 5e-10 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLI 148 MGKEK HIN+VVIGHVDSGKSTTTGHLI Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLI 28 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 154 bits (373), Expect = 1e-38 Identities = 80/167 (47%), Positives = 102/167 (61%), Gaps = 1/167 (0%) Frame = +3 Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329 ++ G I+ R++ K EA GKGSF YAW+LD + ER RG+T+D+A FE+ K Sbjct: 199 FELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYE 258 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509 I DAPGHRDFI MI G S AD AVL+V + F G NGQTREHA L LG+ ++ Sbjct: 259 IGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEI 318 Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSY-IKKIGYNPXAVAFVPIS 647 +V VNK+D +SE F EI VS + IK +G+ V FVPIS Sbjct: 319 VVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPIS 363 Score = 33.5 bits (73), Expect = 0.027 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +2 Query: 77 KTHINIVVIGHVDSGKSTTTGHLILQM 157 K +++VV GHVDSGKST G ++ ++ Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFEL 201 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 151 bits (367), Expect = 6e-38 Identities = 71/167 (42%), Positives = 106/167 (63%), Gaps = 2/167 (1%) Frame = +3 Query: 159 GGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVTIID 338 G +DKRT+ K E+EA E GK S+ +W LD ERE+G T+++ FET +++D Sbjct: 263 GMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLD 322 Query: 339 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVR 518 APGH+ ++ NMI G SQAD VL+++A GEF G GQTREHA+LA T G+ L+V Sbjct: 323 APGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVV 382 Query: 519 VNKMDSTEPPYSEPXFXEIXXEVSSYIKKI-GYNPXA-VAFVPISGW 653 +NKMD +SE + E ++S +++++ GYN V ++P+S + Sbjct: 383 INKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAY 429 Score = 38.3 bits (85), Expect = 0.001 Identities = 15/24 (62%), Positives = 20/24 (83%) Frame = +2 Query: 77 KTHINIVVIGHVDSGKSTTTGHLI 148 K H+NIV IGHVD+GKST G+++ Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNIL 259 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 97.9 bits (233), Expect = 1e-21 Identities = 53/130 (40%), Positives = 76/130 (58%) Frame = +3 Query: 207 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTS 386 ++G+ SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG + Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138 Query: 387 QADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMDSTEPPYSEPXF 566 D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVE 191 Query: 567 XEIXXEVSSY 596 E+ +S Y Sbjct: 192 MEMRELLSEY 201 Score = 33.5 bits (73), Expect = 0.027 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +2 Query: 71 KEKTHINIVVIGHVDSGKSTTT 136 ++K H+NI IGHVD GK+T T Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLT 70 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 49.6 bits (113), Expect = 4e-07 Identities = 35/98 (35%), Positives = 47/98 (47%) Frame = +3 Query: 240 VLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 419 V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+ Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126 Query: 420 GTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD 533 G QT+ A G+ ++I VNKMD Sbjct: 127 SAG-------VEAQTKVVWKQATKRGIPKVIF-VNKMD 156 Score = 25.4 bits (53), Expect = 7.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLI 148 N+ +I H+D+GK+T T ++ Sbjct: 30 NVGIIAHIDAGKTTLTEKML 49 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 44.0 bits (99), Expect = 2e-05 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 4/101 (3%) Frame = +3 Query: 243 LDKLKAERERGITIDIA----LWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 410 LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+ Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154 Query: 411 VAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD 533 V A G QT + +AF+ + +I +NK+D Sbjct: 155 VDASQG-------IQAQTLSNFYMAFSQNL-VIIPVLNKVD 187 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 39.1 bits (87), Expect = 5e-04 Identities = 22/85 (25%), Positives = 38/85 (44%) Frame = +3 Query: 321 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGV 500 +V+ +D PGH + M+ G + D A+L++A QT EH + + Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162 Query: 501 KQLIVRVNKMDSTEPPYSEPXFXEI 575 K +I+ NK+D +E + I Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSI 187 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 59 PKMGKEKTHINIVVIGHVDSGKST 130 P + + INI IGHV GKST Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 34.7 bits (76), Expect = 0.012 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Frame = +3 Query: 213 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETXKYYVTIIDAPGHRDFIKNMITGTS 386 GK + A+ + + GIT I + F+ ++T +D PGH F G + Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242 Query: 387 QADCAVLIVAAGTG 428 AD VL+VA G Sbjct: 243 IADIVVLVVAGDDG 256 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 33.1 bits (72), Expect = 0.036 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +3 Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREH 473 Y + IID PGH DF + D AVL++ A +G I+ + Q R + Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 31.5 bits (68), Expect = 0.11 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLI 148 MGK N+ VI HVD GKST T L+ Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLV 40 Score = 27.9 bits (59), Expect = 1.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 413 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 31.5 bits (68), Expect = 0.11 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLI 148 MGK N+ VI HVD GKST T L+ Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLV 40 Score = 27.9 bits (59), Expect = 1.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 413 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 30.3 bits (65), Expect = 0.25 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 318 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 428 Y + +ID+PGH DF + + + D A ++V A G Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces pombe|chr 1|||Manual Length = 704 Score = 29.9 bits (64), Expect = 0.34 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 Query: 283 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMVRLSIPPH 155 I IP+ A S+ N++ + +D LP + S V+L +P H Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 29.5 bits (63), Expect = 0.44 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = +3 Query: 246 DKLKAER-ERGITIDIALWKFETXKYYV--TIIDAPGHRDFIKN 368 +K++A+ E+ + I+I + E +++ T+ID PG DFI N Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 29.5 bits (63), Expect = 0.44 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIV 413 IID PGH F GTS + A+L++ Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharomyces pombe|chr 3|||Manual Length = 642 Score = 27.5 bits (58), Expect = 1.8 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 307 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMV 176 S F IS+ +P FSL+ ++ K LPI W S + S V Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 27.1 bits (57), Expect = 2.4 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = +3 Query: 261 ERERGITID-----IALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 413 ERER ++I +A+ + + ID PGH DF+ + + +D VL+V Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,366,755 Number of Sequences: 5004 Number of extensions: 41356 Number of successful extensions: 143 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 136 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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