Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_A02
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 272 2e-73
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 272 2e-73
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 272 2e-73
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 272 2e-73
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 148 4e-36
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 147 5e-36
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 82 3e-16
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 81 6e-16
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 45 4e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 45 4e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 42 3e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 40 0.001
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 40 0.002
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 40 0.002
At5g13650.2 68418.m01585 elongation factor family protein contai... 38 0.006
At5g13650.1 68418.m01584 elongation factor family protein contai... 38 0.006
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.006
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.006
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.006
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.031
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.031
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 34 0.072
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.22
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.2
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.5
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.5
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.0
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.0
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 27 8.2
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 272 bits (666), Expect = 2e-73
Identities = 128/168 (76%), Positives = 141/168 (83%)
Frame = +3
Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
YK GGIDKR I +FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T
Sbjct: 29 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F GIS +GQTREHALLAFTLGVKQ+
Sbjct: 89 VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQM 148
Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653
I NKMD+T P YS+ + EI EVSSY+KK+GYNP + FVPISG+
Sbjct: 149 ICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLILQM 157
MGKEK HINIVVIGHVDSGKSTTTGHLI ++
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 272 bits (666), Expect = 2e-73
Identities = 128/168 (76%), Positives = 141/168 (83%)
Frame = +3
Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
YK GGIDKR I +FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T
Sbjct: 29 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F GIS +GQTREHALLAFTLGVKQ+
Sbjct: 89 VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQM 148
Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653
I NKMD+T P YS+ + EI EVSSY+KK+GYNP + FVPISG+
Sbjct: 149 ICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLILQM 157
MGKEK HINIVVIGHVDSGKSTTTGHLI ++
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 272 bits (666), Expect = 2e-73
Identities = 128/168 (76%), Positives = 141/168 (83%)
Frame = +3
Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
YK GGIDKR I +FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T
Sbjct: 29 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F GIS +GQTREHALLAFTLGVKQ+
Sbjct: 89 VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQM 148
Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653
I NKMD+T P YS+ + EI EVSSY+KK+GYNP + FVPISG+
Sbjct: 149 ICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLILQM 157
MGKEK HINIVVIGHVDSGKSTTTGHLI ++
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 272 bits (666), Expect = 2e-73
Identities = 128/168 (76%), Positives = 141/168 (83%)
Frame = +3
Query: 150 YKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVT 329
YK GGIDKR I +FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T
Sbjct: 29 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88
Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQL 509
+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F GIS +GQTREHALLAFTLGVKQ+
Sbjct: 89 VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQM 148
Query: 510 IVRVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPISGW 653
I NKMD+T P YS+ + EI EVSSY+KK+GYNP + FVPISG+
Sbjct: 149 ICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLILQM 157
MGKEK HINIVVIGHVDSGKSTTTGHLI ++
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKL 31
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 148 bits (358), Expect = 4e-36
Identities = 70/164 (42%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Frame = +3
Query: 159 GGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVTIID 338
G I ++ + K+EKEA GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D
Sbjct: 264 GRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLD 323
Query: 339 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGI-SXNGQTREHALLAFTLGVKQLIV 515
+PGH+DF+ NMI G +QAD A+L++ A G F G + GQTREHA + GV+Q+IV
Sbjct: 324 SPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIV 383
Query: 516 RVNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXAVAFVPIS 647
+NKMD YS+ F I V S+++ + ++ ++P+S
Sbjct: 384 AINKMDIV--GYSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLS 425
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 80 THINIVVIGHVDSGKSTTTGHLI 148
+ +N+ ++GHVDSGKST +G L+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLL 260
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 147 bits (357), Expect = 5e-36
Identities = 74/165 (44%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Frame = +3
Query: 159 GGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVTIID 338
G +D R I K+EKEA + + S+ A+++D + ER +G T+++ FET TI+D
Sbjct: 126 GQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILD 185
Query: 339 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVR 518
APGH+ ++ NMI+G SQAD VL+++A GEF G GQTREH LA TLGV +LIV
Sbjct: 186 APGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVV 245
Query: 519 VNKMDSTEPPYSEPXFXEIXXEVSSYIKKIGYNPXA-VAFVPISG 650
VNKMD +S+ + EI ++ ++K GYN V F+PISG
Sbjct: 246 VNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISG 290
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 74 EKTHINIVVIGHVDSGKSTTTGHLI 148
+K H+N+V IGHVD+GKST G ++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQIL 122
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 82.2 bits (194), Expect = 3e-16
Identities = 42/102 (41%), Positives = 61/102 (59%)
Frame = +3
Query: 243 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 422
+DK E++RGITI A ++ET K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 423 TGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMDSTEPP 548
G QT+EH LLA +GV L+ +NK+D + P
Sbjct: 165 DGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDP 199
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 71 KEKTHINIVVIGHVDSGKSTTT 136
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 81.0 bits (191), Expect = 6e-16
Identities = 41/100 (41%), Positives = 59/100 (59%)
Frame = +3
Query: 243 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 422
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 423 TGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMDSTE 542
G QT+EH LLA +GV ++V +NK D +
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVD 209
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 62 KMGKEKTHINIVVIGHVDSGKSTTTGHLILQM 157
K ++K H+NI IGHVD GK+T T L + +
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMAL 103
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +3
Query: 243 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 422
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 423 TGEFXXGISXNGQTREH 473
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +3
Query: 243 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 422
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 423 TGEFXXGISXNGQTREH 473
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 243 LDKLKAERERGITIDIAL----WKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 410
LD + ERERGITI + + +E + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 411 VAAGTG 428
V A G
Sbjct: 183 VDASQG 188
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 243 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 422
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 423 TG 428
G
Sbjct: 109 EG 110
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLI 148
NI ++ HVD GK+T HLI
Sbjct: 11 NICILAHVDHGKTTLADHLI 30
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 309 TXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAF 488
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 489 TLGVKQLIVRVNKMD 533
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 309 TXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAF 488
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 489 TLGVKQLIVRVNKMD 533
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 37.9 bits (84), Expect = 0.006
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +3
Query: 240 VLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 419
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 420 GTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD--STEPPYSEPXFXEIXXEVSS 593
G QTR A G ++V VNK+D S P + E+ E+++
Sbjct: 180 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDRPSARPEFVVNSTFELFIELNA 231
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 37.9 bits (84), Expect = 0.006
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +3
Query: 240 VLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 419
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 420 GTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD--STEPPYSEPXFXEIXXEVSS 593
G QTR A G ++V VNK+D S P + E+ E+++
Sbjct: 179 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDRPSARPEFVVNSTFELFIELNA 230
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 321 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGV 500
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 501 KQLIVRVNKMD 533
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 243 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 422
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 423 TG 428
G
Sbjct: 196 AG 197
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 77 KTHINIVVIGHVDSGKSTTTGHLI 148
K + NI ++ H+D+GK+TTT ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERIL 117
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 321 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGV 500
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 122 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQL 175
Query: 501 KQLIVRVNKMD 533
K +I+ NK+D
Sbjct: 176 KHIIILQNKID 186
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 261 ERERGITI-----DIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 425
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 426 G 428
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 261 ERERGITI-----DIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 425
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 426 G 428
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.3 bits (75), Expect = 0.072
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Frame = +3
Query: 243 LDKLKAERERGITIDIALWKF---------ETXKYYVTIIDAPGHRDFIKNMITGTSQAD 395
LDKL +RERGIT+ E Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 396 CAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD 533
A+L+V A G QT + LAF + ++ +NK+D
Sbjct: 161 GALLVVDAAQG-------VQAQTVANFYLAFEANL-TIVPVINKID 198
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 324 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 428
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 324 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTLGVK 503
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 504 QLIVRVNKMD 533
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIV 413
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIV 413
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 330 IIDAPGHRDFIKNMITGTSQADCAVLIV 413
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 315 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXXGISXNGQTREHALLAFTL 494
+Y + +ID+PGH DF + D A+++V + G+ +T +L L
Sbjct: 97 EYLINLIDSPGHVDFSSEVTAALRITDGALVVV-----DCIEGVCVQTET----VLRQAL 147
Query: 495 GVK-QLIVRVNKMD 533
G + + ++ VNKMD
Sbjct: 148 GERIRPVLTVNKMD 161
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 89 NIVVIGHVDSGKSTTTGHLI 148
N+ VI HVD GKST T L+
Sbjct: 21 NMSVIAHVDHGKSTLTDSLV 40
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Frame = +3
Query: 249 KLKAERERGITIDIALWKFETXK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 416
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 417 AGTGEFXXGISXNGQTREHALLAFTLGVKQLIVRVNKMD 533
A G QT E A+ +++ +NK+D
Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKID 615
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -2
Query: 473 MLTGLTVXRDTXXEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVL 315
++ + + D F+G + +I LRG+ HVLDE RS++D VL
Sbjct: 343 LIEEIMIGEDKLIHFSGC-EMGQACSIVLRGASHHVLDE--AERSLHDALCVL 392
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,615,537
Number of Sequences: 28952
Number of extensions: 223803
Number of successful extensions: 568
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -