Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_A01
         (653 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.6  

>SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1320

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 392  SGLCSSFSHLGSGSILQAEHCSRLQRQLLWQ 484
            SGLC       SG  ++ EHC R +   +WQ
Sbjct: 1281 SGLCLDSKEAKSGGHVRGEHCKRGEFAQIWQ 1311


>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 7645

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = -3

Query: 210  AGELSIVEQVVYGPLPRCASTRQEHTQVLTKNTESILTNNIKET 79
            +G+LS+   V +  +P  AST  ++TQV    T+ +L  +++ET
Sbjct: 6848 SGDLSLPSIVKFSTVPGSASTPGDYTQV----TDKVLNFDVEET 6887


>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2077

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 486  DCHKSCLCSLEQCSA*SIEPEPRCENEEQSP 394
            DC + C    E C     +  P+C++E+Q P
Sbjct: 1798 DCPRRCFQKCEPCKVLVAKVIPKCQHEQQIP 1828


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,739,580
Number of Sequences: 59808
Number of extensions: 436426
Number of successful extensions: 1140
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)