Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P24
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.7  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 567 TEVVQLRYRSRNRWF 611
           T V++  YRS N WF
Sbjct: 416 TYVLKFEYRSMNSWF 430


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 591 YNVTERPRSESVL 553
           YNV  RPR+ S+L
Sbjct: 401 YNVCFRPRNNSIL 413


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 567 TEVVQLRYRSRNRWF 611
           T  ++  YRS N WF
Sbjct: 416 TYALKFEYRSMNSWF 430


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 567 TEVVQLRYRSRNRWF 611
           T  ++  YRS N WF
Sbjct: 416 TYALKFEYRSMNSWF 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,604
Number of Sequences: 336
Number of extensions: 2922
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)