Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P24
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   2.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   3.6  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    24   4.7  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 488 FLRNVD-SVIGAQRHRLEILRNLCTR*WLNANLTLLRRTKMHFRTFTSIV*YVLI 327
           F+ N +  ++G    R EI  N C   +++    +L R K  +  F  IV  VLI
Sbjct: 174 FITNGEWELLGVPGKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLI 228


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = -1

Query: 338  YVLIRCSRHVLR*NNMLRTWLTDYVRPVKDFKHFFIDLSLWELAC 204
            + +  C R       +L   +TD VRP    +H   D   W   C
Sbjct: 953  HAMFECPRFAEVRQQLLGEGITDPVRPENLQQHLLRDAESWSRIC 997


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 504 LHRDVTLVTCGHNARAKERFRTEVVQLRYRSRNRWFST 617
           LH+ V LV C  N R +  F      ++ + R+R   T
Sbjct: 158 LHQQVGLVACNGNFRPRYPFLNADSHIKRKRRHRTIFT 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,832
Number of Sequences: 2352
Number of extensions: 11634
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)