Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_P20
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 223 6e-59
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 222 2e-58
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 79 3e-15
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 79 3e-15
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.072
At1g80910.1 68414.m09493 expressed protein 34 0.095
At1g16020.2 68414.m01922 expressed protein 32 0.38
At1g16020.1 68414.m01921 expressed protein 32 0.38
At3g57570.1 68416.m06410 expressed protein 29 3.6
At5g26660.1 68418.m03174 myb family transcription factor (MYB4) ... 28 4.7
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 28 4.7
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 28 4.7
At1g57560.1 68414.m06531 myb family transcription factor (MYB50)... 28 4.7
At1g09540.1 68414.m01070 myb family transcription factor (MYB61)... 28 4.7
At4g16146.1 68417.m02449 expressed protein 28 6.2
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 8.2
At3g22170.1 68416.m02798 far-red impaired responsive protein, pu... 27 8.2
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 223 bits (546), Expect = 6e-59
Identities = 106/187 (56%), Positives = 136/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 96 NPLPXFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKI 272
N P F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ EF K+
Sbjct: 77 NKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKL 136
Query: 273 GCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRG 452
EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL + GI RG
Sbjct: 137 NTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRG 196
Query: 453 LFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRXGAKTIKPDT 629
LFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+ G K++KPD
Sbjct: 197 LFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEKSMKPDP 256
Query: 630 KAAQEYF 650
K ++EYF
Sbjct: 257 KLSKEYF 263
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 222 bits (542), Expect = 2e-58
Identities = 104/187 (55%), Positives = 137/187 (73%), Gaps = 2/187 (1%)
Frame = +3
Query: 96 NPLPXFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKI 272
N P F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++ +EF K+
Sbjct: 84 NKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKL 143
Query: 273 GCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRG 452
EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL + GI RG
Sbjct: 144 NTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRG 203
Query: 453 LFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRXGAKTIKPDT 629
LFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+ G K++KPD
Sbjct: 204 LFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEKSMKPDP 263
Query: 630 KAAQEYF 650
K ++EYF
Sbjct: 264 KLSKEYF 270
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +3
Query: 144 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLA 323
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G S D +H A
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKA 145
Query: 324 WINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITIN 500
+ + + + L+SD+ +++ +D+GV + G +P R +++D ++ I N
Sbjct: 146 FASKYK-------LPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNN 198
Query: 501 DLPVGRSVEETLRLVQA 551
+ ++ETL+ ++A
Sbjct: 199 QFQPEKHIDETLKFLKA 215
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 79.0 bits (186), Expect = 3e-15
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Frame = +3
Query: 156 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 332
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 333 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 512
+N P+I+D + I ++D P R L I+ ++ +
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTT 143
Query: 513 GRSVEETLRLVQAFQFTDKHGE--VCPANWR 599
GR+++E LR + + KH P NW+
Sbjct: 144 GRNMDEVLRALDSLLMASKHNNKIATPVNWK 174
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 34.3 bits (75), Expect = 0.072
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 129 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 299
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 300 DSHFTHLAW 326
+ F W
Sbjct: 118 NDPFAINGW 126
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.9 bits (74), Expect = 0.095
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +3
Query: 147 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 305
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78
Query: 306 H 308
H
Sbjct: 79 H 79
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 183 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 308
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 183 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 308
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 583 HTSPCLSVNWNACTSRRVSSTDLPTGRSLMVICLRFCLSSMMKSPRKGMPVSSSST 416
+T CL + + C+S STD+ T + + I R C+++++ S + P SS T
Sbjct: 881 YTIHCLIEDRSNCSSIPKLSTDILTCENPLPIPFRLCMANVIISACQKNPESSKKT 936
>At5g26660.1 68418.m03174 myb family transcription factor (MYB4)
(MYB86) contains Pfam profile: PF00249 myb-like
DNA-binding domain; identical to cDNA putative
transcription factor (MYB86) mRNA, partial cds
GI:3941517
Length = 352
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 447 GRGCPSPRPALRSRGRCGATCRL 379
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
(Ath-A) identical to gi:2827141
Length = 1084
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 431 DGHPLPRTLHHRRQAEPQADHHQR 502
DG+ LPR ++ R+ P DHH++
Sbjct: 516 DGNELPRLVYVSREKRPGFDHHKK 539
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 431 DGHPLPRTLHHRRQAEPQADHHQR 502
DG+ LPR ++ R+ P DHH++
Sbjct: 521 DGNELPRLVYVSREKRPGFDHHKK 544
>At1g57560.1 68414.m06531 myb family transcription factor (MYB50)
similar to DNA-binding protein GI:19058 from [Hordeum
vulgare]
Length = 314
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 447 GRGCPSPRPALRSRGRCGATCRL 379
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>At1g09540.1 68414.m01070 myb family transcription factor (MYB61)
contains PFAM profile: myb DNA-binding domain PF00249
Length = 366
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 447 GRGCPSPRPALRSRGRCGATCRL 379
G GC S P L RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 342 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 467
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 400 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 299
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
>At3g22170.1 68416.m02798 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 839
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 326 DQHAAQAGRTRSHEHPSDKRQVAP 397
D H+ AG+T ++P+ KR+V P
Sbjct: 698 DNHSRSAGKTSKKKNPTKKRKVNP 721
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,058,039
Number of Sequences: 28952
Number of extensions: 215564
Number of successful extensions: 805
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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