Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P19
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalia...   114   5e-26
AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical ...    87   1e-17
Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical pr...    28   4.2  

>U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalian
           transcriptionalregulator) related protein 1.1 protein.
          Length = 187

 Score =  114 bits (274), Expect = 5e-26
 Identities = 64/160 (40%), Positives = 88/160 (55%)
 Frame = +2

Query: 101 AXEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVIL 280
           A EME +IT D+L RG + V  AGL+G+ PV C+R   +VPD  L +   E +++D VIL
Sbjct: 15  AEEMEVIITGDVLARGEIRVVYAGLDGAEPVKCARGAHIVPDVKLED--VETEKFDIVIL 72

Query: 281 PXXXXXXXXXXXXXXVGALLKDHXDNGKXXXXXXXXXXXXXXHGVARGRRVTSYPSTRDK 460
           P              V  +LK   ++G               HGV +   VTS+PS ++K
Sbjct: 73  PGGQPGSNTLAESLLVRDVLKSQVESGGLIGAICAAPIALLSHGV-KAELVTSHPSVKEK 131

Query: 461 LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIXLL 580
           L  G Y Y E +RVVV G ++TSRGPGTA+ F L ++ LL
Sbjct: 132 LEKGGYKYSE-DRVVVSGKIITSRGPGTAFEFALKIVELL 170


>AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical
           protein C49G7.11 protein.
          Length = 186

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 50/160 (31%), Positives = 83/160 (51%)
 Frame = +2

Query: 101 AXEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQQYDAVIL 280
           A E+E ++T D+L RGG+ V  AG   + PV C++   +VPD +L +   + + +D +I+
Sbjct: 16  AEEIEVIVTGDVLVRGGLQVLYAG-SSTEPVKCAKGARIVPDVALKDV--KNKTFDIIII 72

Query: 281 PXXXXXXXXXXXXXXVGALLKDHXDNGKXXXXXXXXXXXXXXHGVARGRRVTSYPSTRDK 460
           P              +G LLK    +G               HG+    RVT + + +DK
Sbjct: 73  PGGPGCSKLAECPV-IGELLKTQVKSGGLIGAICAGPTVLLAHGIV-AERVTCHYTVKDK 130

Query: 461 LSAGDYTYVEGERVVVDGNVVTSRGPGTAYWFGLTLIXLL 580
           ++ G Y Y++ + VV+   V+TS+GPGTA+ F L ++  L
Sbjct: 131 MTEGGYKYLD-DNVVISDRVITSKGPGTAFEFALKIVETL 169


>Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical
           protein C18D11.1 protein.
          Length = 263

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 446 WGMTSRAGPSPRRGLQTLW-EQHKWQQ*FSHY 354
           +G T    P P RG    + EQH+ QQ + HY
Sbjct: 224 YGETHAVAPPPHRGATDYYPEQHRPQQQYGHY 255


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,469,722
Number of Sequences: 27780
Number of extensions: 180067
Number of successful extensions: 385
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)