Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_P16
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 92 8e-18
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 83 4e-15
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 81 1e-14
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 75 8e-13
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 68 2e-10
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 61 2e-08
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 50 3e-05
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 50 4e-05
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 47 2e-04
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 47 3e-04
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 43 0.004
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 42 0.007
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 42 0.007
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 40 0.047
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 40 0.047
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 40 0.047
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 39 0.082
UniRef50_Q9U5R5 Cluster: Putative ribosomal protein; n=1; Entodi... 35 1.3
UniRef50_Q75H88 Cluster: Expressed protein, 3'-partial; n=5; Mag... 33 3.1
UniRef50_Q820B4 Cluster: Apolipoprotein N-acyltransferase; n=4; ... 33 5.4
UniRef50_Q9FKZ0 Cluster: Probable disease resistance protein At5... 32 7.1
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 32 9.4
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 91.9 bits (218), Expect = 8e-18
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
KVTWTVLYRRK +KG EEE +KKRT RTQKFQRAIVGASL++I+A RNMKPEV
Sbjct: 7 KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 83.0 bits (196), Expect = 4e-15
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
++ WTVLYRRK KKGQ EE KKRT R KFQRAI GASL+DIMA RN KPEV
Sbjct: 48 QINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 94 RPWLKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 249
R + + DGK F FLN+KCE+A L +RNPR N + + +KG K+
Sbjct: 19 RRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKK 70
Score = 41.1 bits (92), Expect = 0.015
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 39 MKIGLCAYSGYKIYPGHGKTMA 104
MK+ LC++SGYKIYPGHG+ A
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYA 22
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 81.4 bits (192), Expect = 1e-14
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
++ WTVLYRRK KKGQ EE +KKRT R KFQRAI GASL++I+A RN KPEV
Sbjct: 48 QINWTVLYRRKHKKGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEV 100
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +1
Query: 94 RPWLKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 249
R + +VDGK F FLN+KCE+A L +RNPR N + + +KG SK+
Sbjct: 19 RRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSKK 70
Score = 41.1 bits (92), Expect = 0.015
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 39 MKIGLCAYSGYKIYPGHGKTMA 104
MK+ LC++SGYKIYPGHG+ A
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYA 22
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 75.4 bits (177), Expect = 8e-13
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
+VTWTVLYR K KKG +EE +KKRT R KFQR++ GASL +I+A RN KPEV
Sbjct: 28 EVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGASLDNILAKRNQKPEV 80
Score = 39.1 bits (87), Expect = 0.062
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 118 KTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKETYXKDPK 270
K F FLN +CE A LMRRNPR + + +KG + SK+ ++ K
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIK 57
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/52 (63%), Positives = 37/52 (71%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPE 337
K++WT LYRR KKG EE AKKRT RT K QRAIVGASL I R+ +PE
Sbjct: 48 KISWTTLYRRMHKKGISEEVAKKRTRRTVKHQRAIVGASLDVIKERRSQRPE 99
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
++ WTVL+R+ KKG EE AKKR+ +T K QR I GASL I R++KPEV
Sbjct: 48 RIAWTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 185 VTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
+ W+++YRR +K + AKK+ +T+K +R IVGASL I R KPEV
Sbjct: 49 IRWSMVYRRIYKNTTTDVSAKKKARKTKKVERNIVGASLEVIQQKRAQKPEV 100
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 179 AKVTWTVLYRRKFKKGQEEEQAKKRTXRTQK-FQRAIVGASLSDIMAXRNMKPEV 340
+K+ WT +YR++ KK +E K+R T+K + R+IVGA+L I R KPEV
Sbjct: 49 SKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEV 103
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXR 322
++ WTV +RR KK + +E AKKR R K QRAIVG SL +I R
Sbjct: 50 EIQWTVAWRRLNKKIKTDEGAKKRRIRNLKVQRAIVGISLEEIRRRR 96
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 46.8 bits (106), Expect = 3e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 185 VTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRN 325
+TWT ++RRK +KG + A+ RT RT + +A+VG SL++I RN
Sbjct: 51 LTWTPMWRRKNRKGAYAKAARVRTKRTTRKMKAVVGMSLAEINRIRN 97
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 43.2 bits (97), Expect = 0.004
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 185 VTWTVLYRRKFKKG---QEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRN 325
+ WTVLYR K KKG QE+ KK Q RA+ G SL I+A RN
Sbjct: 49 IRWTVLYRIKNKKGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRN 98
Score = 39.1 bits (87), Expect = 0.062
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 39 MKIGLCAYSGYKIYPGHGKTM 101
MK+ C YSGYKI+PGHGK +
Sbjct: 1 MKVETCVYSGYKIHPGHGKRL 21
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNM 328
K+TWT+ RR +KK + + A+K+ R RAIVG SL +I +N+
Sbjct: 50 KITWTIARRRLWKKVKATDIAQKKKKRNVTVARAIVGISLEEINRRKNL 98
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 179 AKVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRN 325
AK+ W + +R+ KK Q E +KR+ +T + Q+AIVG SL D+ + R+
Sbjct: 58 AKLKWNLAWRKANKKFQTELFNRKRSKKTSRPQKAIVGLSLDDLKSKRS 106
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 39.5 bits (88), Expect = 0.047
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 179 AKVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
AK+ WT +RR KK + E ++R +T K Q+A+ G S+ DI RN K V
Sbjct: 54 AKLRWTQTWRRNNKKTKVEATQRRRYKKTIKVQKAVCGLSVEDI---RNRKAYV 104
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 39.5 bits (88), Expect = 0.047
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 179 AKVTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPEV 340
AK+ WT +RR KK + E ++R +T K Q+A+ G S+ DI RN K V
Sbjct: 54 AKLRWTQTWRRNNKKTKVEATQRRRYKKTIKVQKAVCGLSVEDI---RNRKAYV 104
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 39.5 bits (88), Expect = 0.047
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 185 VTWTVLYRRKFKKGQEEEQAKKRTXRTQKFQRAIVGASLSDIMAXRNMKPE 337
+ WT YRR +K + ++R R + QRAIVGA LS I R + E
Sbjct: 53 IPWTRTYRRIHRKTTTDRVNRRRAARAVRVQRAIVGADLSYIQEVRAARKE 103
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 38.7 bits (86), Expect = 0.082
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQA-KKRTXRTQKFQRAIVGASLSDI 310
KV WT +YR+ KKGQ+ E KK+T R K R G S +I
Sbjct: 50 KVFWTAIYRQLNKKGQQNELVEKKKTRRVIKVNRGYSGISAEEI 93
>UniRef50_Q9U5R5 Cluster: Putative ribosomal protein; n=1;
Entodinium caudatum|Rep: Putative ribosomal protein -
Entodinium caudatum
Length = 110
Score = 34.7 bits (76), Expect = 1.3
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 182 KVTWTVLYRRKFKKGQEEEQAKK-RTXRTQKFQRAIVGASLSDI 310
K+ W + +R KKGQ EE KK + + ++ +AIVG S+ +I
Sbjct: 5 KIRWNLKWRTAHKKGQVEEAKKKVQKQKKERQVKAIVGLSVEEI 48
>UniRef50_Q75H88 Cluster: Expressed protein, 3'-partial; n=5;
Magnoliophyta|Rep: Expressed protein, 3'-partial - Oryza
sativa subsp. japonica (Rice)
Length = 277
Score = 33.5 bits (73), Expect = 3.1
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 300 SEAPTIARWNFWVLXVRFFACSSSWP-FLNLRLYRTVHVTLARIPPHQMG 154
+E P+ + +L + F CSS+ P FL+ R R HV +A PP G
Sbjct: 65 AEGPSSSMSPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPEPAG 114
>UniRef50_Q820B4 Cluster: Apolipoprotein N-acyltransferase; n=4;
Coxiella burnetii|Rep: Apolipoprotein N-acyltransferase
- Coxiella burnetii
Length = 485
Score = 32.7 bits (71), Expect = 5.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 303 LSEAPTIARWNFWVLXVRFFACSSSWPFLNLRLYRTVHVTLA 178
L P +A W W+ FF +SW ++++ + +V LA
Sbjct: 38 LRSRPLVAWWRGWLFGFGFFGAGASWVYVSIHHFGNANVPLA 79
>UniRef50_Q9FKZ0 Cluster: Probable disease resistance protein
At5g66910; n=3; Arabidopsis thaliana|Rep: Probable
disease resistance protein At5g66910 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 815
Score = 32.3 bits (70), Expect = 7.1
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 318 LAIMSLSEAPTIARWNFWVLXVRFFACSSSWPFLNLRLYRTVHVTLARIPPHQMG 154
+A M + TIA F+ + F+C SS P L + V VTL IP Q+G
Sbjct: 572 IAEMKKLKVLTIANHGFYPARLSNFSCLSSLPNLKRIRFEKVSVTLLDIPQLQLG 626
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 31.9 bits (69), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 21 SFCQVKMKIGLCAYSGYKIYPGHGK 95
S + +K LC+YS Y+IYPG G+
Sbjct: 2 STVKTTIKTDLCSYSEYRIYPGRGR 26
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,029,969
Number of Sequences: 1657284
Number of extensions: 6837038
Number of successful extensions: 15616
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15601
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -