Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_P16
(528 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962... 54 7e-08
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 54 7e-08
07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689... 53 2e-07
03_05_0593 - 25959013-25959789 33 0.11
04_03_0395 - 15356255-15356292,15356507-15356620,15356728-153568... 30 1.3
07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938... 29 1.7
07_01_0917 + 7735696-7735896,7735907-7736404,7736481-7736813,773... 29 1.7
10_07_0113 - 12993300-12993413,12993493-12993775,12993856-129940... 29 3.1
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 29 3.1
05_03_0664 - 16762121-16762637,16762704-16763331,16763418-16763637 28 5.3
12_02_0466 + 19403855-19404347,19404359-19404582,19404659-194050... 27 7.1
12_01_0857 - 8043765-8043839,8044215-8044497,8044578-8044748,804... 27 7.1
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 27 7.1
04_03_0116 - 11448012-11448525,11448693-11448763,11449139-114494... 27 7.1
05_07_0285 + 28982502-28982782,28982888-28982989,28983189-289840... 27 9.3
>05_05_0279 -
23794964-23795111,23795486-23795634,23796120-23796221,
23796309-23796384,23796578-23796588
Length = 161
Score = 54.0 bits (124), Expect = 7e-08
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 179 AKVTWTVLYRRKFKKGQEEEQAKKRTXRTQK-FQRAIVGASLSDIMAXRNMKPEV 340
AK+TWT +YR++ KK E KKR T+K + R+IVGASL I R KPEV
Sbjct: 49 AKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGASLEVIQKKRAEKPEV 103
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 39 MKIGLCAYSGYKIYPGHG 92
+K LC +SG KIYPG G
Sbjct: 3 LKTELCRFSGQKIYPGKG 20
>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 54.0 bits (124), Expect = 7e-08
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 179 AKVTWTVLYRRKFKKGQEEEQAKKRTXRTQK-FQRAIVGASLSDIMAXRNMKPEV 340
AK+TWT +YR++ KK E KKR T+K + R+IVGA+L I R+ KPEV
Sbjct: 1059 AKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEV 1113
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 51 LCAYSGYKIYPGHG 92
LC +SG KIYPG G
Sbjct: 1017 LCRFSGQKIYPGKG 1030
>07_01_0849 +
6896930-6896996,6897453-6897474,6897615-6897690,
6897775-6897876,6898156-6898304,6898637-6898784
Length = 187
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 179 AKVTWTVLYRRKFKKGQEEEQAKKRTXRTQK-FQRAIVGASLSDIMAXRNMKPEV 340
AK+TWT +YR++ KK E KKR T+K + R+IVGA+L I R KPEV
Sbjct: 75 AKLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEV 129
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 33 VKMKIGLCAYSGYKIYPGHG 92
+K+ LC +SG KIYPG G
Sbjct: 27 LKVWTELCRFSGAKIYPGKG 46
>03_05_0593 - 25959013-25959789
Length = 258
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 300 SEAPTIARWNFWVLXVRFFACSSSWP-FLNLRLYRTVHVTLARIPPHQMG 154
+E P+ + +L + F CSS+ P FL+ R R HV +A PP G
Sbjct: 46 AEGPSSSMSPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPEPAG 95
>04_03_0395 -
15356255-15356292,15356507-15356620,15356728-15356809,
15356862-15357236,15357256-15357320,15357534-15357662,
15357759-15357854,15357959-15357983
Length = 307
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 194 SMLL*RGFLLIKWAASHFEFRNVKVFPSTLSHGLAMAWIYFV 69
+M++ RG LL+ + ++R K FP+ L HG+ IYFV
Sbjct: 238 NMVVWRGELLLIIRHYNGDYRGCKSFPAGLHHGVEGDHIYFV 279
>07_01_1199 +
11391638-11391718,11393477-11393590,11393690-11393826,
11393905-11394064
Length = 163
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 100 WLKVDGKTFTFLNSKCEAAHLMRRNPR 180
+++ D K F F SKC M+RNPR
Sbjct: 21 FVRNDAKIFRFCRSKCHKNFKMKRNPR 47
>07_01_0917 +
7735696-7735896,7735907-7736404,7736481-7736813,
7736991-7737314,7737367-7737836,7738165-7738447,
7738527-7738640
Length = 740
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -2
Query: 170 LLIKWAASHFEFRNVK--VFP-STLSHGLAMAWIYFVSTIGAKSDLHFDLTKRKDLSI 6
+ +KW++ H+ N+K ++ S + L AW +V+ G D H L +KD I
Sbjct: 617 ITLKWSSVHYLNSNIKPEIYDWSAIESALNEAWDQYVARGGRHKDGHPKLGHKKDFPI 674
>10_07_0113 -
12993300-12993413,12993493-12993775,12993856-12994026,
12994104-12994948,12995035-12995307,12995549-12995953
Length = 696
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 161 KWAASHFEFRNVK--VFP-STLSHGLAMAWIYFVSTIGAKSDLHFDLTKRKDLSI 6
KW+ H+ N+K ++ S + L AW +V+ G D H L +KD I
Sbjct: 576 KWSLVHYLNSNIKPEIYDWSAIESALNEAWDQYVARDGKHKDRHPKLGHKKDFPI 630
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -2
Query: 170 LLIKWAASHFEFRNVK--VFP-STLSHGLAMAWIYFVSTIGAKSDLHFDLTKRKDLSI 6
+ +KW+ H+ N+K ++ S + L AW +V+ G D H L +KD I
Sbjct: 629 ITLKWSRVHYLNSNIKPEIYDWSAIESALNEAWDQYVARGGRHKDGHPKLGHKKDFPI 686
>05_03_0664 - 16762121-16762637,16762704-16763331,16763418-16763637
Length = 454
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -2
Query: 167 LIKWAASHFEFRNVKVFPSTLS--HGLAMAW 81
+++WA H +F +VF +++S HG + W
Sbjct: 313 MLQWAREHMDFATTRVFFTSMSPTHGKSQDW 343
>12_02_0466 +
19403855-19404347,19404359-19404582,19404659-19405093,
19405180-19406024,19406353-19406635,19406903-19406977
Length = 784
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 161 KWAASHFEFRNVK--VFP-STLSHGLAMAWIYFVSTIGAKSDLHFDLTKRKDLSI 6
KW+ H+ N+K ++ S + L AW +V+ G D H L +KD I
Sbjct: 677 KWSLVHYLNSNIKPEIYDWSAIESALNEAWDQYVARGGRHKDGHPKLGHKKDFPI 731
>12_01_0857 -
8043765-8043839,8044215-8044497,8044578-8044748,
8044826-8045670,8045828-8046262,8046339-8046563,
8046700-8046781,8046814-8047067
Length = 789
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 161 KWAASHFEFRNVK--VFP-STLSHGLAMAWIYFVSTIGAKSDLHFDLTKRKDLSI 6
KW+ H+ N+K ++ S + L AW +V+ G D H L +KD I
Sbjct: 682 KWSLVHYLNSNIKPEIYDWSAIESSLNEAWDQYVARGGRHKDGHPKLGHKKDFPI 736
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -2
Query: 158 WAASHFEFRNVK--VFP-STLSHGLAMAWIYFVSTIGAKSDLHFDLTKRKDLSIN 3
W+ H+ N+K ++ S + + L AW +V+ G D H L +KD I+
Sbjct: 610 WSLVHYLNSNIKPEIYDWSAIEYALNKAWDQYVTRGGRHKDGHPKLGHKKDFPIH 664
>04_03_0116 -
11448012-11448525,11448693-11448763,11449139-11449421,
11449520-11449672,11449750-11450219,11451470-11451631,
11451718-11451987,11452229-11452633
Length = 775
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 161 KWAASHFEFRNVK--VFP-STLSHGLAMAWIYFVSTIGAKSDLHFDLTKRKDLSI 6
KW+ H+ N+K ++ S + L AW +V+ G D H L +KD I
Sbjct: 498 KWSLVHYLNSNIKPEIYDWSAIESALNEAWDQYVARGGRHKDGHPKLGHKKDFPI 552
>05_07_0285 +
28982502-28982782,28982888-28982989,28983189-28984006,
28984594-28985050,28985203-28985242
Length = 565
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 167 GGILAKVTWTVLYRR-KFKKGQEEEQAK 247
GGILA T LYRR ++K+G ++ Q++
Sbjct: 151 GGILATTATTNLYRRQRYKEGMKDIQSQ 178
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,806,191
Number of Sequences: 37544
Number of extensions: 193014
Number of successful extensions: 528
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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