Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P11
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1186 + 31567425-31567438,31568168-31568254,31568335-315684...    27   9.9  
01_06_0707 + 31355929-31356244,31356766-31356992,31357081-313572...    27   9.9  

>04_04_1186 +
           31567425-31567438,31568168-31568254,31568335-31568410,
           31568516-31568590,31568678-31568731,31569722-31569781,
           31569910-31570026,31570389-31570483,31570603-31570805,
           31571224-31571321,31571585-31571688,31571872-31571920,
           31571988-31572110,31572566-31572648,31573533-31573674,
           31574399-31574428,31574452-31574508,31574545-31574615,
           31574715-31575318
          Length = 713

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +3

Query: 543 RKIRXFVYYFRGHGKLQLQLVEM*IVIAVDQLVARMI 653
           RK   FV Y +GH ++  QLV++  + ++ +++ R+I
Sbjct: 92  RKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLI 128


>01_06_0707 +
           31355929-31356244,31356766-31356992,31357081-31357257,
           31357355-31357510,31357778-31358054,31358192-31358306,
           31360349-31360634,31361196-31361381,31361663-31361833,
           31362307-31362426
          Length = 676

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +2

Query: 212 YSVYSF*KSKFQRASEGII---IYFSNTTFTVLSEGAKSRVPECGRVL 346
           YS++   K +F+R   G++   ++ +N+TF +   GA+S + + G+ +
Sbjct: 304 YSIWVDSKYQFRRDPIGVLEALLWRTNSTFAISEHGARSNIYDEGKAI 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,295,407
Number of Sequences: 37544
Number of extensions: 244429
Number of successful extensions: 395
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)