Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P11
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142998-1|AAI42999.1|  492|Homo sapiens asparagine-linked glyco...    30   8.3  
BC111022-1|AAI11023.1|  493|Homo sapiens ALG11 protein protein.        30   8.3  
BC073862-1|AAH73862.1|  221|Homo sapiens ALG11 protein protein.        30   8.3  
BC010857-1|AAH10857.3|  363|Homo sapiens ALG11 protein protein.        30   8.3  
AL139082-3|CAI12890.1|  492|Homo sapiens UTP14, U3 small nucleol...    30   8.3  
AK128503-1|BAC87472.1|  328|Homo sapiens protein ( Homo sapiens ...    30   8.3  

>BC142998-1|AAI42999.1|  492|Homo sapiens asparagine-linked
           glycosylation 11 homolog (S. cerevisiae,
           alpha-1,2-mannosyltr protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/39 (30%), Positives = 27/39 (69%)
 Frame = -3

Query: 210 NIKIRLSINCRNKNPECKLYRVRTLQCNILVEEHIFFRV 94
           ++K+ L   CRNK+ E ++ ++R L  ++ V+E++ F++
Sbjct: 336 SLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKI 374


>BC111022-1|AAI11023.1|  493|Homo sapiens ALG11 protein protein.
          Length = 493

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/39 (30%), Positives = 27/39 (69%)
 Frame = -3

Query: 210 NIKIRLSINCRNKNPECKLYRVRTLQCNILVEEHIFFRV 94
           ++K+ L   CRNK+ E ++ ++R L  ++ V+E++ F++
Sbjct: 337 SLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKI 375


>BC073862-1|AAH73862.1|  221|Homo sapiens ALG11 protein protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/39 (30%), Positives = 27/39 (69%)
 Frame = -3

Query: 210 NIKIRLSINCRNKNPECKLYRVRTLQCNILVEEHIFFRV 94
           ++K+ L   CRNK+ E ++ ++R L  ++ V+E++ F++
Sbjct: 65  SLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKI 103


>BC010857-1|AAH10857.3|  363|Homo sapiens ALG11 protein protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/39 (30%), Positives = 27/39 (69%)
 Frame = -3

Query: 210 NIKIRLSINCRNKNPECKLYRVRTLQCNILVEEHIFFRV 94
           ++K+ L   CRNK+ E ++ ++R L  ++ V+E++ F++
Sbjct: 207 SLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKI 245


>AL139082-3|CAI12890.1|  492|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog C (yeast) protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/39 (30%), Positives = 27/39 (69%)
 Frame = -3

Query: 210 NIKIRLSINCRNKNPECKLYRVRTLQCNILVEEHIFFRV 94
           ++K+ L   CRNK+ E ++ ++R L  ++ V+E++ F++
Sbjct: 336 SLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKI 374


>AK128503-1|BAC87472.1|  328|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46655 fis, clone TRACH3005274, weakly  similar
           to Glycosyltransferase ALG11 (EC 2.4.1.-). ).
          Length = 328

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/39 (30%), Positives = 27/39 (69%)
 Frame = -3

Query: 210 NIKIRLSINCRNKNPECKLYRVRTLQCNILVEEHIFFRV 94
           ++K+ L   CRNK+ E ++ ++R L  ++ V+E++ F++
Sbjct: 172 SLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKI 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,530,110
Number of Sequences: 237096
Number of extensions: 1421319
Number of successful extensions: 3415
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3415
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)