Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_P10
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 210 2e-54
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 210 2e-54
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 210 2e-54
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 210 2e-54
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 210 2e-54
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 210 2e-54
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 52 1e-06
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 32 1.5
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 32 1.5
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 32 1.5
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 32 1.5
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 32 1.5
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 32 1.5
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 32 1.5
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 32 1.5
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 32 1.5
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 32 1.5
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 210 bits (514), Expect = 2e-54
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = +2
Query: 41 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 217
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 218 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 397
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 398 VYNAILEDLVFPAEIVGKRIRVQV 469
V++AILEDLVFP+EIVGKRIRV++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKL 148
Score = 76.2 bits (179), Expect = 9e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 465 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPE 599
KLDGS+LIKVHLDK QQ +EHKV+TF VY KLTG++V FEFPE
Sbjct: 147 KLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 210 bits (514), Expect = 2e-54
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = +2
Query: 41 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 217
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 218 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 397
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 122
Query: 398 VYNAILEDLVFPAEIVGKRIRVQV 469
V++AILEDLVFP+EIVGKRIRV++
Sbjct: 123 VHDAILEDLVFPSEIVGKRIRVKL 146
Score = 76.2 bits (179), Expect = 9e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 465 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPE 599
KLDGS+LIKVHLDK QQ +EHKV+TF VY KLTG++V FEFPE
Sbjct: 145 KLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 210 bits (514), Expect = 2e-54
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = +2
Query: 41 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 217
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 218 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 397
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 398 VYNAILEDLVFPAEIVGKRIRVQV 469
V++AILEDLVFP+EIVGKRIRV++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKL 148
Score = 76.2 bits (179), Expect = 9e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 465 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPE 599
KLDGS+LIKVHLDK QQ +EHKV+TF VY KLTG++V FEFPE
Sbjct: 147 KLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 210 bits (514), Expect = 2e-54
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = +2
Query: 41 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 217
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 218 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 397
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 398 VYNAILEDLVFPAEIVGKRIRVQV 469
V++AILEDLVFP+EIVGKRIRV++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKL 148
Score = 76.2 bits (179), Expect = 9e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 465 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPE 599
KLDGS+LIKVHLDK QQ +EHKV+TF VY KLTG++V FEFPE
Sbjct: 147 KLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 210 bits (514), Expect = 2e-54
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = +2
Query: 41 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 217
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 218 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 397
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 398 VYNAILEDLVFPAEIVGKRIRVQV 469
V++AILEDLVFP+EIVGKRIRV++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKL 148
Score = 76.2 bits (179), Expect = 9e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 465 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPE 599
KLDGS+LIKVHLDK QQ +EHKV+TF VY KLTG++V FEFPE
Sbjct: 147 KLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 210 bits (514), Expect = 2e-54
Identities = 103/144 (71%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = +2
Query: 41 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 217
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 218 PMPKLKAFXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 397
P+P+LK+F KIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 398 VYNAILEDLVFPAEIVGKRIRVQV 469
V++AILEDLVFP+EIVGKRIRV++
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKL 148
Score = 76.2 bits (179), Expect = 9e-14
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 465 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPE 599
KLDGS+LIKVHLDK QQ +EHKV+TF VY KLTG++V FEFPE
Sbjct: 147 KLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/30 (80%), Positives = 30/30 (100%)
Frame = +2
Query: 380 SRTLTSVYNAILEDLVFPAEIVGKRIRVQV 469
SRTLT+V++AILEDLVFP+EIVGKRIRV++
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKL 39
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 465 KLDGSQLIKVHLDKNQQTTIEHKV 536
KLDGS+LIKVHLDK QQ +EHKV
Sbjct: 38 KLDGSRLIKVHLDKAQQNNVEHKV 61
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 77 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 238
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 239 FXKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYNAILE 418
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 419 DLVFP 433
+ P
Sbjct: 823 QKIIP 827
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,151,070
Number of Sequences: 237096
Number of extensions: 1905538
Number of successful extensions: 3631
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3625
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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