Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P09
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   0.44 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   0.44 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   2.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   3.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   3.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   7.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   9.5  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTATTAIAPSAK 99
           P++   QVKRNVP  T    P A+
Sbjct: 195 PTYKWMQVKRNVPKPTVPKIPPAE 218


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTATTAIAPSAK 99
           P++   QVKRNVP  T    P A+
Sbjct: 195 PTYKWMQVKRNVPKPTVPKIPPAE 218


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTAT 123
           P++   QVKRNVP  T
Sbjct: 195 PTYKWMQVKRNVPKPT 210


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTATTAIA 111
           PS +   + R+ PT  TAIA
Sbjct: 241 PSVMYPHLNRSSPTTATAIA 260


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTATTAIA 111
           PS +   + R+ PT  TAIA
Sbjct: 189 PSVMYPHLNRSSPTTATAIA 208


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTATTAIA 111
           PS +   + R+ PT  TAIA
Sbjct: 372 PSVMYPHLNRSSPTTATAIA 391


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -1

Query: 312 IYNIILLDSKHKRVHV----SIILRTKLFFRCTMFXYY 211
           ++ + LL S +  VH+      I+ T  F  CT + YY
Sbjct: 68  VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYY 105


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 256 FANKIIFPLHYVLXLXSPI 200
           FA  I+F L +   L SPI
Sbjct: 136 FAGLIVFILFFAQGLTSPI 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,850
Number of Sequences: 336
Number of extensions: 1297
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)