Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P09
         (375 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0108 - 12628711-12629178                                         29   0.90 
06_01_0471 - 3341839-3341881,3341987-3342080,3344724-3344914,334...    29   1.2  
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915...    27   3.6  
07_01_0991 - 8358309-8358338,8359115-8359393,8359964-8360092,836...    27   3.6  
07_01_1067 + 9437996-9438093,9438368-9438419,9440437-9440511,944...    27   4.8  
05_01_0438 + 3475017-3475484                                           27   4.8  
08_02_0640 - 19636968-19638230                                         27   6.3  

>01_03_0108 - 12628711-12629178
          Length = 155

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 285 KHKRVHVSIILRTKLFFRCTMFXYYXRRFAP*APCGGGTFLSCHASKEKC 136
           KHK+V ++++   K+    T      R+  P A CG GTF++ H  +  C
Sbjct: 94  KHKKVKLAVLQFYKVD-DATGKVTRLRKECPNAECGAGTFMANHFDRHYC 142


>06_01_0471 -
           3341839-3341881,3341987-3342080,3344724-3344914,
           3345025-3345248
          Length = 183

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 96  CFSTRRDGGCGGRNISLYLRG 158
           C   RRDGGCGG  + + + G
Sbjct: 87  CLHRRRDGGCGGGYVKVKMEG 107


>08_02_0751 +
           20789843-20789908,20791152-20791313,20791516-20791566,
           20792096-20792160,20792385-20792459,20792603-20792780,
           20793171-20793353,20793436-20793549,20793627-20793736,
           20793826-20793904,20794035-20794172
          Length = 406

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTATTAIAPSAKALAA 87
           P+ ++  V   VPTATTA AP+A   AA
Sbjct: 112 PAPVSEPVTAPVPTATTASAPAAAVTAA 139


>07_01_0991 -
           8358309-8358338,8359115-8359393,8359964-8360092,
           8360317-8360598,8361400-8361525,8363490-8363870
          Length = 408

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 140 NVPTATTAIAPSAKALAADVL 78
           ++PT TTA +P+ KAL  D+L
Sbjct: 25  HLPTTTTAASPALKALGEDLL 45


>07_01_1067 +
           9437996-9438093,9438368-9438419,9440437-9440511,
           9441455-9441523,9443711-9444232
          Length = 271

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 111 RDGGCGGRNISLYLRGKKGRFPHR 182
           RDGG GGR  SL +R + GR   R
Sbjct: 101 RDGGIGGRCPSLPIRSRGGRAGER 124


>05_01_0438 + 3475017-3475484
          Length = 155

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 285 KHKRVHVSIILRTKLFFRCTMFXYYXRRFAP*APCGGGTFLSCHASKEKC 136
           KHK+V ++++   K+    T      R+  P   CG GTF++ H  +  C
Sbjct: 94  KHKKVKLAVLQFYKVD-DATGKVTRLRKECPNNDCGAGTFMANHFDRHYC 142


>08_02_0640 - 19636968-19638230
          Length = 420

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
 Frame = -2

Query: 170 PSFLATQVKRNVPTAT-----TAIAPSAKALAADVLLPCELEFLVIAKWQFIC 27
           P  LA QV R +P         A+ P  +  A + LLP  L  L +    F C
Sbjct: 24  PRDLAVQVLRFLPAQVDRACFAAVCPQWRGAARNALLPAPLPLLALPDGAFYC 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,711,866
Number of Sequences: 37544
Number of extensions: 162824
Number of successful extensions: 378
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)