Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P09
         (375 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   0.70 
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   3.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   6.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   8.7  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 189 APCGGGTFLSCHASKEKCSDRHNR 118
           A  GG TFLSC+A   + +D   R
Sbjct: 81  AEIGGTTFLSCYAPPRQPTDEFER 104


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 92  LML*H*ARWRLWRSEHFSLLAWQERKVPPPHGAQGANR 205
           LM  + AR+R+   +H  LL +  R+   P G   A++
Sbjct: 123 LMATNAARYRMVAGKHIHLLEFGLRRAQGPDGGLSASK 160


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 189 APCGGGTFLSCHAS 148
           A  GG TF+SC+AS
Sbjct: 78  ADIGGITFISCYAS 91


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 146 LLAWQERKVPPPHGAQ 193
           LL WQ+R   PP+ A+
Sbjct: 932 LLPWQDRNNLPPYAAR 947


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 189 APCGGGTFLSCHA 151
           A  GG TFLSC+A
Sbjct: 137 AKVGGITFLSCYA 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,624
Number of Sequences: 2352
Number of extensions: 5962
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)