Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P06
         (534 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16U72 Cluster: Transmembrane protein, putative; n=2; C...    41   0.015
UniRef50_UPI0000F1D7CE Cluster: PREDICTED: hypothetical protein;...    34   2.3  
UniRef50_A7F5I9 Cluster: Predicted protein; n=1; Sclerotinia scl...    33   4.1  
UniRef50_UPI0000382875 Cluster: COG1928: Dolichyl-phosphate-mann...    32   7.2  
UniRef50_Q0PC93 Cluster: Putative integral membrane protein; n=3...    32   9.5  
UniRef50_A5B138 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_Q54RQ6 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_A0BM88 Cluster: Chromosome undetermined scaffold_116, w...    32   9.5  

>UniRef50_Q16U72 Cluster: Transmembrane protein, putative; n=2;
           Culicidae|Rep: Transmembrane protein, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 322

 Score = 41.1 bits (92), Expect = 0.015
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   LKSFVCIXLNDWYKNSKGEPVAVLASPFDDVVNWCVXMLKWGIXFGLNILTEHPWIWQI- 178
           +KSFV     DWYKN+  E V V  SPFD VV   V  LK    +   + T  P I+ + 
Sbjct: 226 VKSFVTFA-QDWYKNASPEKVPVPQSPFDQVVEQAVHHLKNLPEYVNQLKTAQPTIFYVI 284

Query: 179 -XIAGFGLVALTALIAI 226
             +  F +V  +A I +
Sbjct: 285 CGLIVFVIVGFSAAIVL 301


>UniRef50_UPI0000F1D7CE Cluster: PREDICTED: hypothetical protein;
           n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 593

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -1

Query: 477 LNIHTSLQTKNFKQFYNSTCASLIKKINPHICTVFFTLQTGRKSYQTHDFLNALRIIS 304
           LNI  +L   NF  F N T  S I  INP++  +  T+ T   ++ T +F     I++
Sbjct: 56  LNIICNLIITNFPTFINLTIISSILNINPNLIIITITIFTNVITFLTTNFTTIFSILN 113


>UniRef50_A7F5I9 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 942

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +2

Query: 26  LNDWYKNSKGEPVAVLASPFDDVVNWCVXMLKWGIXFGLNILTEHPWIWQIXI-AGFGLV 202
           +N W   S  E V    SPFD  V W V      +  G  +    P  WQ  I + FG+V
Sbjct: 532 VNSWNDTSDAEGVVEYPSPFDTFVQW-VQGWVGSVLTGSEVFGLLPGRWQACILSTFGMV 590

Query: 203 AL 208
           AL
Sbjct: 591 AL 592


>UniRef50_UPI0000382875 Cluster: COG1928:
           Dolichyl-phosphate-mannose--protein O-mannosyl
           transferase; n=1; Magnetospirillum magnetotacticum
           MS-1|Rep: COG1928: Dolichyl-phosphate-mannose--protein
           O-mannosyl transferase - Magnetospirillum
           magnetotacticum MS-1
          Length = 284

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 119 KWGIXFGLNIL--TEHPWIWQIXIAGFGLVALTALIAIIK 232
           KW I  G+  L   E+PW W+I  A  G+VA+  +  I +
Sbjct: 78  KWMIALGMKALGGAENPWSWRIASAVVGVVAVVLVARIAR 117


>UniRef50_Q0PC93 Cluster: Putative integral membrane protein; n=3;
           Campylobacter jejuni|Rep: Putative integral membrane
           protein - Campylobacter jejuni
          Length = 593

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
 Frame = +3

Query: 246 SH*RKQKKIXNVNXKTYFFVK*FLMHLKSHVFDNF--SVLFVR*KKQYKYVGLFFLLKKR 419
           S+ +K       N    + +  FL  +KS +F +F   V +V     +   G F  L K 
Sbjct: 438 SYEKKNNVSKKQNINFIYIIGDFLNLIKSLLFASFIPCVFYVL----FSLFGFFLNLGKD 493

Query: 420 RCYCKIV*NFLFVXMYVYLXFIQILYFNKYNK*IF 524
             Y  ++ N LFV +Y+ L + + L+F +Y   IF
Sbjct: 494 FGYSLLI-NTLFVSLYICLVYTKSLFFGRYVVLIF 527


>UniRef50_A5B138 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 180

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 438 QFYNSTCASLIKKINPHICTVFFTLQTGRKSYQTHDFLNALRIISQKNR 292
           +FY+S C SLI    P  C + +T+    KS Q H  L+ L+   +K R
Sbjct: 111 KFYSSYCLSLILPSFPEWCLLLYTIPWSIKSIQHH--LDTLKQSKRKGR 157


>UniRef50_Q54RQ6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 581

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 456 QTKNFKQFYNSTCASLIK-KINPHICTVFFTLQ 361
           QTK FK+ ++STC +L K  I  +IC  F T Q
Sbjct: 168 QTKKFKKLFSSTCTNLKKVHILMNICAHFITAQ 200


>UniRef50_A0BM88 Cluster: Chromosome undetermined scaffold_116,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_116,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 590

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -1

Query: 477 LNIHTSLQTKNFKQFYNSTCASLIKK-INPHICTVFFTLQTGRKSYQTHDFLNALRIIS 304
           +NI+ S     F+   N     + K  IN ++C  F  LQ  +   +   FLNALRI+S
Sbjct: 50  ININLSKDPCRFEALKNYQWKRIAKSNINQNLCREFQYLQIIKGELKNDQFLNALRILS 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,994,586
Number of Sequences: 1657284
Number of extensions: 7773273
Number of successful extensions: 19753
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19750
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)