Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P06
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.55 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   0.73 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.8  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 136 RSQYTHRTPMDMANXNSWFWIGSFDSFNCNY*SRKIKA 249
           +  Y  R P +  N N  FW+G  D+    Y +  +KA
Sbjct: 369 KGSYIFRLPDE--NNNGGFWVGYEDTDTAGYKASYVKA 404


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 403 KNKPTYLYCFFYLTNRTEKLSN 338
           KN  TY++  FYL+ R   L N
Sbjct: 197 KNCVTYVFDLFYLSKRASDLCN 218


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 406 KKNKPTYLYCFFYLTNRTEKLSNT*LFKCIKN 311
           K++K  Y Y  FY+T+ T  LS   LF+   N
Sbjct: 49  KQHKSDYFYFSFYITSYT-LLSVYSLFRIATN 79


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 406 KKNKPTYLYCFFYLTNRTEKLSNT*LFKCIKN 311
           K++K  Y Y  FY+T+ T  LS   LF+   N
Sbjct: 49  KQHKSDYFYFSFYITSYT-LLSVYSLFRIATN 79


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -1

Query: 468 HTSLQTKNFKQFYNSTCASLIKKINPHICTVFFTLQ 361
           +T  +TK +   +N+    + K      C VF  LQ
Sbjct: 254 YTETETKTWGSVFNTVLELMPKHACSEYCRVFKMLQ 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,530
Number of Sequences: 336
Number of extensions: 2347
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)