Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_P06
         (534 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021487-12|CAA16358.2|  324|Caenorhabditis elegans Hypothetical...    32   0.30 
Z83239-10|CAB05812.2|  324|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U23524-6|AAC46820.1|  383|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AL032663-12|CAA21768.2|  324|Caenorhabditis elegans Hypothetical...    27   8.5  

>AL021487-12|CAA16358.2|  324|Caenorhabditis elegans Hypothetical
           protein Y45F10B.6 protein.
          Length = 324

 Score = 31.9 bits (69), Expect = 0.30
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
 Frame = -1

Query: 450 KNFKQFYNSTCASLIKKINPHICTVFFTLQTGRKSYQTHDFLNALRI-----------IS 304
           K FK F+ S     ++ +NPH+  V    Q     Y   D+L  +RI           I 
Sbjct: 46  KVFKVFWGSLFEKRMESLNPHVFLVIVVSQLTSILYMISDYL-TIRIPFTGAITSWCAIQ 104

Query: 303 QKNRF-XYLRXLSFFVSFSGFDLPALIIAIKAVKATNPK 190
           Q N F   L  LS + +F+ +  P+L+  ++ +    P+
Sbjct: 105 QPNHFLKILFFLSIYFTFTSWLFPSLLSTLRVISIYFPQ 143


>Z83239-10|CAB05812.2|  324|Caenorhabditis elegans Hypothetical
           protein T09F5.11 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 22/85 (25%), Positives = 31/85 (36%)
 Frame = -1

Query: 282 LRXLSFFVSFSGFDLPALIIAIKAVKATNPKPAIXICHIHGCSVSILRPNXIPHFSIXTH 103
           LR LSF  S   +DL   I+ +   K      A+   ++    + +       HF I T 
Sbjct: 192 LRKLSFLQSIDQYDLFETIVHLDQWKEAKVLEALFSTYL----IDVEELFHFEHFKIKTD 247

Query: 102 QFTTSSNGEARTATGSPLEFLYQSL 28
            FTT    + R        F Y  L
Sbjct: 248 SFTTEDAIQTRDILTVSAHFQYAKL 272


>Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical
           protein C03E10.3 protein.
          Length = 386

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 387 ICTVFFTLQTGRKSYQTHDFLNALRIISQKNRFXYLRXLSFFVSF 253
           +  +FF +Q    S+  + FLN L + S +  + YL  L F  SF
Sbjct: 331 VIKMFFNIQFREPSFSNNCFLNILYLSSNQITYIYL-YLFFVTSF 374


>U23524-6|AAC46820.1|  383|Caenorhabditis elegans Hypothetical
           protein C29F5.1 protein.
          Length = 383

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -1

Query: 273 LSFFVSFSGFDLPALIIAIKAVKATNPKPAIXICHIHGC 157
           L +F     F  PA+       K   P P + +C +H C
Sbjct: 284 LGWFKGNGDFGKPAIYTLQDVSKMMKPLPLVSLCKVHDC 322


>AL032663-12|CAA21768.2|  324|Caenorhabditis elegans Hypothetical
           protein T09F5.11 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 22/85 (25%), Positives = 31/85 (36%)
 Frame = -1

Query: 282 LRXLSFFVSFSGFDLPALIIAIKAVKATNPKPAIXICHIHGCSVSILRPNXIPHFSIXTH 103
           LR LSF  S   +DL   I+ +   K      A+   ++    + +       HF I T 
Sbjct: 192 LRKLSFLQSIDQYDLFETIVHLDQWKEAKVLEALFSTYL----IDVEELFHFEHFKIKTD 247

Query: 102 QFTTSSNGEARTATGSPLEFLYQSL 28
            FTT    + R        F Y  L
Sbjct: 248 SFTTEDAIQTRDILTVSAHFQYAKL 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,474,455
Number of Sequences: 27780
Number of extensions: 196456
Number of successful extensions: 447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)